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berkeley_reactor_200306_biofilm_scaffold_132711_20

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 15328..16347

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI000376DFB3 similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 312.0
  • Bit_score: 364
  • Evalue 1.10e-97
Inner-membrane translocator {ECO:0000313|EMBL:CDX36340.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 315.0
  • Bit_score: 489
  • Evalue 2.50e-135
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 316.0
  • Bit_score: 362
  • Evalue 9.30e-98

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGACCAGCGCGAACATCGTCTCGGCGAATCGCGCCGCCGATCGGTCGGCCACTGCCGCGCGGCGTCGGCGCTCGATTCTCATCTTCATCTCGCGTTACGCCACCTTCATCGGCCTGCTCGCGATGATCTTCTTCTTCTCGATCAACGCACCGGACACGTTCTTCTCGCGCGCGAATTTCATCAACATCCTGAGCCAGGCTTCGCTGACGGCGATCATCGCGGCGGGTCTCACCTACACGCTGGTGGTCGGCGAGTTCGATCTCTCGATCGGCTATGTCGCAAGCTTCGTCGGCCTGATGGTCGCGGGCTTCATGGCAAAGGCCGGGCTTCCCATCGCCGCTGCGATCGCCCTCGCGCTGCTCATCGGCATCGGTCTCGGGCTGATCAACGGGACGCTCGTGACCAAGGTGCGCATCAACGCCGTCATCGCCACCCTCGGCGTCGGCACGATGCTGAGTGGCATCGGCTTCTCCTACAGCGCCTTCCCCATCGCCATGGGCATCCCACGCGCGTTCGGCAGCATCGCCATCGGGCGGCCGCTCTTCGGCATCCCGAATCCGGTCTTCGTCATGGTGGTGGTGCTGGTCGTTCTTTGGATCGTCCTCAACAAGACGGAAATGGGCCAACGCATGCAGGCGGTCGGCAGCAATATCGAAGCCGCGCGCCTTTCCGGCATCCGCGTCGACCGCATCAAGATGTTTGCTTTTGGGGTGGCCGGCTTCTGCGCGGCGCTGACCGGCGTGCTGCTGACCTCGCTCCTCGGGAGCGGCACGCTCGGAGCCGCCGACGGCTACTTGCTCGACGCCTTCGCCGCGGTCTTCCTCGGTTCGGCGACGCTGCGGGAAGGCCAGTTCCACATTTTCGGTACGTTGATCGGCGTGCTGGTGCTCGCCGTCGGCTTCAACGGCCTCAGCATCTTCGGCGCCCCGACCTATTTCCAGCCGATCTTCAAAGGCGGCGTCCTTGTCCTCGCCGTCGGCCTCTCGAGCCTTGCCCGCCGCTATGCCGCACTGACGTAG
PROTEIN sequence
Length: 340
MTSANIVSANRAADRSATAARRRRSILIFISRYATFIGLLAMIFFFSINAPDTFFSRANFINILSQASLTAIIAAGLTYTLVVGEFDLSIGYVASFVGLMVAGFMAKAGLPIAAAIALALLIGIGLGLINGTLVTKVRINAVIATLGVGTMLSGIGFSYSAFPIAMGIPRAFGSIAIGRPLFGIPNPVFVMVVVLVVLWIVLNKTEMGQRMQAVGSNIEAARLSGIRVDRIKMFAFGVAGFCAALTGVLLTSLLGSGTLGAADGYLLDAFAAVFLGSATLREGQFHIFGTLIGVLVLAVGFNGLSIFGAPTYFQPIFKGGVLVLAVGLSSLARRYAALT*