ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_15132_28

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(20836..21573)

Top 3 Functional Annotations

Value Algorithm Source
Probable transcriptional regulatory protein Sinac_5499 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLU2_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 245.0
  • Bit_score: 436
  • Evalue 9.90e-120
YebC/PmpR family DNA-binding regulatory protein similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 245.0
  • Bit_score: 436
  • Evalue 2.80e-120
Probable transcriptional regulatory protein Sinac_5499 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 245.0
  • Bit_score: 436
  • Evalue 1.40e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 738
ATGGCTGGTCATTCCCATTCGGCGAACATCGCGCACCGCAAGGGGGTCGTCGACGCCAAGCGCGGTAAGCTATTCAGCAAGCTCTGCCGTGCCATCTTCGTCGCCGCCCGCAACGGCGGGGGTGACCCCGACGCGAATCTGAAGCTCCGCTACGCCATCGACAAGGCACGATCCTATAGCTGCCCGAAGGACAACATCGAGCGTTCGATCAAGAAGGGGACCGGCGAGCTCGGCGCCGAGAACTACGAGGAAGTGATCTACGAAGGCTATGGGCCGAATGGCGTGGCGGTCCTCTGCGAAGTCCTGACGGACAACCGAAACCGGACCGCGGGCGAGCTCCGCAAGATCTTCGAGGTCTGCGGCGGAAACCTCGGTTCGACGGGATGCGTCAACTATCTCTTCTCATTCAAGGGTGTTTTCGTCATCGAGGCGAAGACCGTCGCCGAGGACCGCTTGACCGAAGTCGTCCTCGAGGTCGGGGCCGACGACTTGCAGCGGATCGACGACTACTACGAGGTCACCTGCGACCCCAAGTCGTTCGAGGCGGTCCGCAAGGGTCTCGAAGCCCACAAGATCGCGACGGAGAGCGCCGAGACGAGCTATATTCCGAACACGATGGTCGACCTCGACGTCGAAAACGGCAAGCGAATGCTCAGGCTTCGGGACCTGTTCGACGAGAATGACGACGTCCAGAACGTTTACGCCAACGACAACATCCCCGAAGAGGCCACGGCGTAA
PROTEIN sequence
Length: 246
MAGHSHSANIAHRKGVVDAKRGKLFSKLCRAIFVAARNGGGDPDANLKLRYAIDKARSYSCPKDNIERSIKKGTGELGAENYEEVIYEGYGPNGVAVLCEVLTDNRNRTAGELRKIFEVCGGNLGSTGCVNYLFSFKGVFVIEAKTVAEDRLTEVVLEVGADDLQRIDDYYEVTCDPKSFEAVRKGLEAHKIATESAETSYIPNTMVDLDVENGKRMLRLRDLFDENDDVQNVYANDNIPEEATA*