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berkeley_reactor_200306_planktonic_scaffold_10709_30

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(31500..32858)

Top 3 Functional Annotations

Value Algorithm Source
Amino acid/peptide transporter n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XPJ1_9BACT id=5223858 bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 456.0
  • Bit_score: 531
  • Evalue 5.50e-148
Amino acid/peptide transporter {ECO:0000313|EMBL:EHO43362.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 453.0
  • Bit_score: 367
  • Evalue 2.50e-98
tppB; amino acid/peptide transporter similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 459.0
  • Bit_score: 320
  • Evalue 5.40e-85

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Taxonomy

Caldithrix abyssi → Caldithrix → Bacteria

Sequences

DNA sequence
Length: 1359
ATGTCGAGTGCCCTCCAAATCGATAACCCCGCCGAGGCCGGCCGGGCTCGTCACCCCAAAGGGCTCTATGTGCTCTTCGCCACCGAGATGTGGGAGCGTTTCAGCTTCTACACGATGCTGGCGATGCTCACGCTCTACCTCCAGGACTCCAAGGAGGGGTTCGGCTGGCCCGAACAGACGGCGACGGGTATCTATTCGAACTACCTCATGTTCGTTTATGCCAGCCCGCTCATCGGTGGCTTCCTCGCCGATCGAACGCTGGGCTTTCGGCGATCCATCGTCTTGGGCAGCCTCTTCATGATCGTGGGACACGTCCTGCTCGCGTTCCCGACAGTCCTCGCTCTCTACGCGGCGTTGACCTGCCTCATCGTCGGGAACGGGTTCTTCAAGCCGAACGTGTCGGCCATGGTCGGCAGCCTCTATCCGCCCGGCAGTCCGCTTCGCGACGCGGCCTACAACATCTTTTATATGGGGATCAATGTCGGTGCGTTCATCGCCCCGTTGACGGCCGAGGCCATCAAGCAACGCTGGGGCTTCCACCCCGCCTTCGTCGTCGCTGGCGGGGGGATGGTGATCTCCCTCGTCGTGTTCACCACTCTCCGACGTTACATCGTCGCGGCCGACAAACGACTCGAGTCGGAGGACGAAGTGAAGTCGACGGCCATCGATCTGATCCCGGAGTGGGAGCGGATCCGGGCCCTCGTGGTCGTCTTCGTGATGGTCATCGTCTTCTGGATGATCTTCCATCAGAACGGGAGCACGTTGACCTACTGGGCCAACGACAACACCGACTGGAAGTCTTCGACGGTCCTACCCCTGATCATCAAGATGCTCAGCCTCGGATTCGTCAAAGGTGAAGACGTCTCGGGGGTCGTCTCGAACTCGATCAACCCCTTCTGGATCATCGTCCTGTCCCTGCCCCTCGTTCGCTTTTGGGCCTGGTTGAACAAACGCGGACTGGAGCCTTCGACTCCCGCCAAGCTCGCCATAGGGATGACGCTGACCGGCCTTTCGTTCCTCATCCTATACGTCGCGGCCCGCAGTGGTGGCGACGGCGGCAAGGTGTCCCCCTGGTGGTTGGTCGCGGCCTATTTCGTGATCTCGCTCGGAGAGCTGCATCTCAGCCCGATGGGCCTCTCGCTGGTCTCCAAGGTGGCCCCGGCGCGGATGCGCGGGATCATGATGGGCGGCTGGTTCGTCTCCACGGCGATCGGAAACAAGCTGACGATGATCGGGAAATACTGGAGCGTCTGGAGCCATTCGCAATTCTTCCTCACACTGGCATGCATGGCACTCGTGATGGCCGTCTTGCTGTTCGGCCTGCTCCGGCCGCTGAAGCGTGCGATGCCGGGTGTCTAG
PROTEIN sequence
Length: 453
MSSALQIDNPAEAGRARHPKGLYVLFATEMWERFSFYTMLAMLTLYLQDSKEGFGWPEQTATGIYSNYLMFVYASPLIGGFLADRTLGFRRSIVLGSLFMIVGHVLLAFPTVLALYAALTCLIVGNGFFKPNVSAMVGSLYPPGSPLRDAAYNIFYMGINVGAFIAPLTAEAIKQRWGFHPAFVVAGGGMVISLVVFTTLRRYIVAADKRLESEDEVKSTAIDLIPEWERIRALVVVFVMVIVFWMIFHQNGSTLTYWANDNTDWKSSTVLPLIIKMLSLGFVKGEDVSGVVSNSINPFWIIVLSLPLVRFWAWLNKRGLEPSTPAKLAIGMTLTGLSFLILYVAARSGGDGGKVSPWWLVAAYFVISLGELHLSPMGLSLVSKVAPARMRGIMMGGWFVSTAIGNKLTMIGKYWSVWSHSQFFLTLACMALVMAVLLFGLLRPLKRAMPGV*