ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_27256_21

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(24075..24650)

Top 3 Functional Annotations

Value Algorithm Source
YbhB YbcL family protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRI3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 188.0
  • Bit_score: 188
  • Evalue 6.30e-45
YbhB YbcL family protein {ECO:0000313|EMBL:EHO40136.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 188.0
  • Bit_score: 188
  • Evalue 8.80e-45
phospholipid-binding protein, pbp family similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 152.0
  • Bit_score: 172
  • Evalue 7.70e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldithrix abyssi → Caldithrix → Bacteria

Sequences

DNA sequence
Length: 576
ATGCGTCGAGCGGTCGTTGTCGTGTTTTTCATCGCCCCTGGCCTCGTCTCGTGTGGGCGCGGTCCCAAGACCCCGGTCATCCCGGTCGGGAACCCGCAGCGGGTGAGCATGACGCTGGAGAGCCCGGCGTTCGCGAACGGGAAGGAGATCCCGAAGGCGTACACTTGCGCCGGGAAGGACGTCTCGCCGCCGCTGGCCTGGTCCGGTGCCCCCGGGTCCGTCCGCTCGTTCGCCCTGCTCTGCGACGACCCCCGCACGCCCCAGGGGATCTTCACGCACTGGATCGTCTACAACATCCCCGCCGGCACGAAGGAGCTCCCCGAGGGCCTCGCTCCCGAGGCCCAGGTCAAGCTCGGCACGTCCGGCACGGTCGCCATGCAGGGCCTGAACGACTTCGGCAAGGTCGGATACGGCGGCCCTTGCCCCCCAAGCGGGAGTCATCGCTACCTCTTCCGGGTCTACGCCCTCGACACGACCCTCGACCTCAAGCCCGGCGCGAGCCGCGAGCAGTTCATCCAGGCCATCACCGACCACATCGTCGTGGAAGGGCGGCTTTCCGGGACGTCGACGCCCTGA
PROTEIN sequence
Length: 192
MRRAVVVVFFIAPGLVSCGRGPKTPVIPVGNPQRVSMTLESPAFANGKEIPKAYTCAGKDVSPPLAWSGAPGSVRSFALLCDDPRTPQGIFTHWIVYNIPAGTKELPEGLAPEAQVKLGTSGTVAMQGLNDFGKVGYGGPCPPSGSHRYLFRVYALDTTLDLKPGASREQFIQAITDHIVVEGRLSGTSTP*