ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_97220_22

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 26295..26996

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein Crp n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5STP9_PLAL2 similarity UNIREF
DB: UNIREF100
  • Identity: 37.7
  • Coverage: 223.0
  • Bit_score: 134
  • Evalue 7.70e-29
regulatory protein Crp similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 223.0
  • Bit_score: 134
  • Evalue 2.20e-29
Regulatory protein Crp {ECO:0000313|EMBL:ADG69078.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.7
  • Coverage: 223.0
  • Bit_score: 134
  • Evalue 1.10e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 702
ATGCGGATCGACAAGGAATGGGCCGAGCGATTCGCTCGGGCTTGTGTCCGGGTGCCTTGGGCGCGTCGGCTCTCGCTGGCCTCGGCAGAAGTGCTCTACTCGGCGGCACCCCAAGGACGATGCTGGGTCGTCGCCAGCGGATACGTCAAGCTGATCGACCCGCGTCCCGATGGCGACCGCTTCATCCGACTGATCCACGGCCGGGGCGGCCTGTTCGGCGATCGACCTTTCGGCACGAAGGCCTTCCATGGATTCCCGTCCGTCCATTACGAGCTGGCCGTGGCCCACGGACCCGCCGAGGTCGTGGAAGTCGGGCGAGCGGAGCTCGAGGCCGCGGCGCTCGCGGATGCCGACCTGGCCGCGCTCCTGCTCGAATCGGCGGCGGTGCGCGCGGAATTCCTCGAGCGGCGACTGCTCTGGCAGTGCACATCGCCGATCCGGGCACGCCTGGCGGCCGCGCTCCGGGACCTGATCTGCTACGAGGGTGACCGCTGCCGGCACGGGCACACGATCGACGTCCGCCTGAGCCACCAGGACCTGGCGGAGCTCGTCGGTGCCGCACGGCCCGTGGTCAGCGCCGAACTGGCCCGGATGCGAAGAGAGGGACTGGTCCAGTACACTCGCTGCTACTTCTGCGTGGACGACCTGGATGGCCTGAGTCGCATCGCCGCCGGGGACGCCTCAGACGAGTGTTCCGCTTGA
PROTEIN sequence
Length: 234
MRIDKEWAERFARACVRVPWARRLSLASAEVLYSAAPQGRCWVVASGYVKLIDPRPDGDRFIRLIHGRGGLFGDRPFGTKAFHGFPSVHYELAVAHGPAEVVEVGRAELEAAALADADLAALLLESAAVRAEFLERRLLWQCTSPIRARLAAALRDLICYEGDRCRHGHTIDVRLSHQDLAELVGAARPVVSAELARMRREGLVQYTRCYFCVDDLDGLSRIAAGDASDECSA*