ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_90456_2

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 1815..2291

Top 3 Functional Annotations

Value Algorithm Source
MarR family transcriptional regulatory protein n=1 Tax=mine drainage metagenome RepID=E6QME0_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 126.0
  • Bit_score: 99
  • Evalue 2.40e-18
Uncharacterized protein {ECO:0000313|EMBL:KKK47737.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 109.0
  • Bit_score: 132
  • Evalue 4.70e-28
BlaI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 143.0
  • Bit_score: 96
  • Evalue 5.80e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 477
GTGCCACGACCCGTCTCGGAGATCCTGACCGAGCGCGAAGCGCAGCTCATGGAAATCCTCTGGCAACTGGGGGACGGGACGGCGGAGCAGGTCCGCGAGGCCTTGCCGGACCAGCCCCACGACTCGACCGTACGGACGCTCCTGCGGTCCCTGGAAAGCAAAGGGTACGTCGAACACGACGACCGCGGCAAGGCCTACACGTATCGCGCGGCGGTCAGCCGGGCGAAGGTGCAGCGGTCCGCGATCCGAAACGTCCTGTCTCGTTTCTTCGGCGGCTCGGCGGAGGACCTCGTCCTCCGACTGATCGAGGATGAGCGGATCACCCCCGAGCAGTTGGAGGAGATCCGCCAGTCGACCCAGTCCGCGACCGATCCGACGCCTCCACCTCCACCTCCACCTCCACCTCCGTCCCCGACTCCGGTGCCCTCTCCCATCCCAACCCGGCGCAAGTCGCGCCGACGAGGAGACCTCTCATGA
PROTEIN sequence
Length: 159
VPRPVSEILTEREAQLMEILWQLGDGTAEQVREALPDQPHDSTVRTLLRSLESKGYVEHDDRGKAYTYRAAVSRAKVQRSAIRNVLSRFFGGSAEDLVLRLIEDERITPEQLEEIRQSTQSATDPTPPPPPPPPPPSPTPVPSPIPTRRKSRRRGDLS*