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berkeley_reactor_200306_planktonic_scaffold_97220_126

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(166528..167706)

Top 3 Functional Annotations

Value Algorithm Source
Pectate lyase, PelA/Pel-15E family n=2 Tax=Singulisphaera acidiphila RepID=L0D7R7_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 367.0
  • Bit_score: 576
  • Evalue 1.70e-161
pectate lyase, PelA/Pel-15E family similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 367.0
  • Bit_score: 576
  • Evalue 4.80e-162
Pectate lyase, PelA/Pel-15E family {ECO:0000313|EMBL:AGA24701.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 367.0
  • Bit_score: 576
  • Evalue 2.40e-161

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1179
ATGTTGCGGTCGTCGATCGTCGTGATGCTTCTTGGACTGGCGCCGGGCGTGTCCGAGAAACCGCCTGAATTGAAGCCGATCTCCGTCCGAGGGTTCGGCAGCAGCGCCCATCATTGGCGGGACATCCGCGACTCGGGTCGCGTCATCCAGGCGGTCCCCGGTCAGCCGTCGCACGCGCCCGGCCAGGTGCGTGCGATCGTGGCGAACATCTTGCTGTTCCAGAGGGACAACGGGGGTTGGCCGAAGGACTACGACATGACGGCGGTCCTCACCCCCGAGCAGGAGGCCGCCGTCGCCGCGACCCGATCACACTCGGATACGTCGTACGACAACTCCAACCTCCACTCCCAGGTCGACTACCTGGCCCGCGCCGTCGCCCAGGACCCGGGACCCTCCTGGCGGCGAGCCTGCGAGCGGGGCTTCGACTTCCTCCTCGCCTCGCAGTACCCCAACGGCGGATTCCCTCAGCGATATCCGAATCCTAAGGACTTCCACGCGCATATCACGTTCAATGACGGCGTCATGATCGGGATCCTGGACGTCCTGGAGGACGCCGCGAGCGGCGCCCCGCACTTCGCCTGGCTCGATCAAGACCGACGCGAGAAGGCACGAGAGGCCGTCCGCCGAGGCGTGGCCTGCATCCTCAAATGTCAGATCCGCGCGGGAGACGCCCTCACGGGCTGGTGCCAGCAGCACGACGAAGTCACGTACGCAGCCCGCCCGGCCCGGACGTTCGAGCTGGCCTCGACGTGCCCCCAGGAGACGACGGAGATCGTCCGGTTCCTGATGCGCCAGGACCATCCGGGCCCCGAGATCCTCGCGGCCACGGACGCCGAGTTCGCGTGGCTGACGCGGGTCAAGCTTTCCGGGGTCCGCGTGGCGAAGGTGAAGGCCCCGAAGGAGGATTTCCTCCGCCACAGCGCCGACTTCGACACCATCGTCGTCGAAGACCCTGCGAGCCGCCCCCTCTGGGCCCGCCACTATGAAATCGGCACCGACCGCCCCGTCTTCGCCGGCCGCGACGGCGTGAAAAGGTATGCCCTGGCCGAAATCGAACGCGAGCGCCGAACGGGATCCCCCTGGTATGGAGGTTGGCCGTCGACGCTCATCGAGGGTGATTATTCCCGATGGCGGGGGAGGTATTCACCACAAAGGCACGAAGACACAAAGAGCAAATAG
PROTEIN sequence
Length: 393
MLRSSIVVMLLGLAPGVSEKPPELKPISVRGFGSSAHHWRDIRDSGRVIQAVPGQPSHAPGQVRAIVANILLFQRDNGGWPKDYDMTAVLTPEQEAAVAATRSHSDTSYDNSNLHSQVDYLARAVAQDPGPSWRRACERGFDFLLASQYPNGGFPQRYPNPKDFHAHITFNDGVMIGILDVLEDAASGAPHFAWLDQDRREKAREAVRRGVACILKCQIRAGDALTGWCQQHDEVTYAARPARTFELASTCPQETTEIVRFLMRQDHPGPEILAATDAEFAWLTRVKLSGVRVAKVKAPKEDFLRHSADFDTIVVEDPASRPLWARHYEIGTDRPVFAGRDGVKRYALAEIERERRTGSPWYGGWPSTLIEGDYSRWRGRYSPQRHEDTKSK*