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berkeley_reactor_200306_planktonic_scaffold_149613_19

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 30116..30742

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QXJ8_ISOPI similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 194.0
  • Bit_score: 150
  • Evalue 1.20e-33
sigma-70 familyRNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 194.0
  • Bit_score: 150
  • Evalue 3.40e-34
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADV63046.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 194.0
  • Bit_score: 150
  • Evalue 1.70e-33

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Taxonomy

Isosphaera pallida → Isosphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 627
ATGATCATCTCAAACGAGATCGACGGCGAAGGACGGCCGGTGTCGGACGCGATGTCGGATCTCCTCGCGCGAGTCCGCGAGGGGGACGAGGACGCGCTGGCGGATTTGCTTCGGCATTACGAGCCGAAGATCCGCCTCACGGCCCACTACTTAATCCGACCGATCCTCAGGCGTTATCTGGATTCGATCGACGTGGCGCAATCGGTGCAGTTCGACCTGATGCGCGGGCTGCGGGTGGGGAGCTTCCACCTCTCCGATTCGGACACGTTCGTGGCCCTGGCCGTGACGGTGGTCCGGCGCAAGGTGGCGCGGCACTGGCGGCACCTCCAGCGGGAGCACCGGCTCCGGTTCGGCGACCCGGACGGGCAGGGGCCCCCGGAGTGCCGCCCGGCCCCCGCCGAGGCGCCGAGCGATCCCGCCCGCGCCGCCCAGCATGGCGACGAGCTCGAAGCCCTCTGGCGCAAGCTCGACCCGACGGAACGCCGATTGATGGAGCTCCGGCTCCAGGGCTATTCGACCGAGGAAGCGGCCGCCGAGATGGGTTGCGCCGCCAACGTGCTCCGCGTCCGGTTGAGCCGATTGCGCAAGCGCCTCCAGGAACAAGGGCAGCCGGCCGACTGGGCCTGA
PROTEIN sequence
Length: 209
MIISNEIDGEGRPVSDAMSDLLARVREGDEDALADLLRHYEPKIRLTAHYLIRPILRRYLDSIDVAQSVQFDLMRGLRVGSFHLSDSDTFVALAVTVVRRKVARHWRHLQREHRLRFGDPDGQGPPECRPAPAEAPSDPARAAQHGDELEALWRKLDPTERRLMELRLQGYSTEEAAAEMGCAANVLRVRLSRLRKRLQEQGQPADWA*