ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_164514_1

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 1..387

Top 3 Functional Annotations

Value Algorithm Source
transposase IS4 family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C560B similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 125.0
  • Bit_score: 177
  • Evalue 5.70e-42
Uncharacterized protein {ECO:0000313|EMBL:KKL76245.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 115.0
  • Bit_score: 134
  • Evalue 5.90e-29
transposase, IS4 family protein similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 61.0
  • Bit_score: 64
  • Evalue 1.50e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 387
GGACGTCCGGTGCTACGGAGCCAGACCCCCGGGGGCGTCGTGCAGGAATTGTACGGCCTCGTGTTGGGGCACTACATCGTCCGGGTCCTGATGCAAGAAGCGGCTACGACTCAGGGGATCGATCCGCGTCGGCTCTCGTTCACTGGGAGCCTGAAAATCCTGCGGTGTCGGTTGCCTGAGTGCCCAGTCAGCCGTCGGGGCTGCAGTCAGTGGTATCGCAACCTGATCGCGGAGATCGCCGAAGAAGTGCTGGAGCCACGACGTAACCGGATCAACCCCCGCGTCATCAAACGGAAGATGAGCAACTGGAAGAAGAAAAGGCCCGAGCATCGGAATTATCCTCAACCTGCCAAGGCGTTTCGCGACGCGATCGTCATGCGCCGTTGA
PROTEIN sequence
Length: 129
GRPVLRSQTPGGVVQELYGLVLGHYIVRVLMQEAATTQGIDPRRLSFTGSLKILRCRLPECPVSRRGCSQWYRNLIAEIAEEVLEPRRNRINPRVIKRKMSNWKKKRPEHRNYPQPAKAFRDAIVMRR*