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berkeley_reactor_200306_planktonic_scaffold_165720_10

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 8609..11233

Top 3 Functional Annotations

Value Algorithm Source
Cbb3-type cytochrome oxidase, subunit 1 {ECO:0000313|EMBL:AKF46353.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AKF46353.1};; TaxID=1324931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. syringae B301D.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 465.0
  • Bit_score: 564
  • Evalue 1.60e-157
Putative cytochrome C subunit protein n=1 Tax=Pseudomonas fluorescens (strain SBW25) RepID=C3K887_PSEFS similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 453.0
  • Bit_score: 563
  • Evalue 3.30e-157
putative cytochrome C subunit protein similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 453.0
  • Bit_score: 563
  • Evalue 9.30e-158

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Taxonomy

Pseudomonas syringae → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2625
ATGACGACTGAAGCAAGGCCATCGGGCGCCCCGCCCACGATCCCCGCCCTGATTCGCTGGCACGGCTACGCCGCCCTGGCGAGCGTGCTCTACGTCGCCGTGCTCGGGCTGGTGATGGCGATCCGGTTCCACGCGCCGGACTGGCTCGGCGATGTGCCCTGGCTGTCTTGGGGACGGATCCGCTACGCCCACACCCAAGGGCTCTTCTTCGGCTGGCTGGGGAACGCCTTCCTCGCCTTCCTGTACTTCGTCGTGCCCCGGCTGGCGGCGCGCCCCGTCACGAGCGTCCGGCTCGGCTGGGTGCTGTTCGCCGTCTGGAACGGCTTGCTGGTCTTGCCCGGGTGGGCCCTGGTGCAGGCCGGCGTGAGCCAGCCGCTCGAATGGGCCGAGTTCCCGCTCCCCGTCGACGGGGCGGCGACCCTGGGGATGCTCCTGGCCGCCGGCCAGTTCGTCGTCCCGCTGGCGAGGGCCCGCGTGCCGAGCCTCTACGTCTCGGCCTGGTACATCCTGGGCGGGTTGACCTTCACCCTGCTGGCCTACCCGATCGGCAACGTCGTGCCCGAATTCCTCCCGGGCGCCCAGGGGGCGACGTTCAGCGGGCTCTGGATCCACGACGCCGTCGGGCTGTTCGTCACCCCGCTGGCCCTCGCCATCGCCTACGCCGTCATCCCCTCGGTCTCCGGCCGGCCGATCTTCAGCCACTTCCTGTCGATGATCGGGTTCTGGCTGCTGTTCCTGCTCTACCCGCTCAACGGCACGCACCACTATGTCTTCTCATCGATCCCGATGGAGGCCCAGAAGGGCGCGATCGTTGCCTCGGTCTACCTCGGGGCCGACGTCGTCCTGGTAGTGACGAACCTGCTCCTGTCGCTCCGGGGCCGATCCGGCATCGCCGCCTCCGACGCGCCTCTGCGCTACGTCTGGGCCGGGACGGTGGCCTACCTGATCGTCAGCCTCCAGGGCTCGGCCCAGGCGATCATGCCGCTGAACCGCTTCACCCACTTCAGCGACTGGGTGATCGGCCACTCGCACCTGGCGATGATCGGGTTTGCCTCGTTCACGGCCCTGGGGGGCCTCCTGCACGCCTGGCGGCTCACGCCGGGATGCCGATTCAACCGCGAGGCGGCCGGATGGTCGTTCTGGCTGCTGACCATCGGCCTGGCGGGGATGGTCCTCGACCTCACGGTCGCGGGGGTCGTCCAGGGTCAGCTCTGGCAAGGCGACCTGCCCTGGATGGAGTCGGTGCGGGCCTCGGCCCCGTTCTGGTGGGTCCGCTCGATCTCCGGCAGCATCGTCCTGATCGGGTTCCTCGCCGTGGTGGCGGCGATGACGACCGGCCCGCTCATCGCCCCGGCCCCGGTGCGCCAGCCCGACGCCGAGTCGAGCCAGCAGCCCGACGCCGAGGAGGAAATCGGCGGCTTCCGCTGGCTCAAGAACGCCTACGTCCTGGTCGCCGGGGCCGGGTTCGGCCTGTTCGCCTTCTCGTTCGTCGTCCTGGGCCTCTGGCCGAACCGGGATCTCCGCGAGCAGATCGCCCGGACGCGGCCGACCGGCTCGGGGGCGATGTCGGCCTCCGAAGCTCGGGGACGGCTGGTCTACGCCCGCGAAGGGTGCCTGAACTGCCACTCGCAACTGGTCCGATTCACCGAGGAGGACGTGCGGCGATTCGGGCCGGCGAGCCAGGCGTGGGAGGGCGACGGCGACGCCCCCCAGATGTGGGGGACTCGGCGAATCGGCCCGGACCTGGCCCGCGAGGGCGGGCGGAGGCCGAGGGACTGGCAGCTCGCCCACCTGTGGAACCCGCGCGACGTCGTCCCCGATTCGATCATGCCCGGTTATCGTTGGCTCTTCGACGGCTCGCCGACCCGGCCGAGGCCCGAGGCGCACGACCTGGTGGATTACCTGGAATCCCTGGGGCGCGACGCCAGGCTCGCGGGCCTGTCCGCACCGGGACCGCTGCCGGGCCGCGACCCCGAGGAGGAGCGGCGCGAGGGGATGTTCTGCGACTGCTCCATCCCCCGGACCGCCGGCAAGGCCCCGGTCTGGGACCTCGCGCTGGCGGTCGGCGAGGCGGAGCGATTCGCCCGGCGAGGGGCCGAGGTCTTCTCCCGCGACTGCGCCGGCTGCCACGGGACGGCCGGTCGAGGGGACGGGCCGGCGGCGGTCGCCTTGACCCCGCCCCCTCGCGACCTGGCCCTCGCCCGGTTCTCCGAACGACGCTTGAGCGACGCGTTGTGGAACGGGGTCCGCGGTTCCTCCATGCCCCCCTGGAACGACCTGGGCGCGGGGGACCTCCGCGGACTGGTCGCCTTCCTGGGGACGATCGCGCCGGCAGAGCCGGCCCCCGAGCTGAAGGCCGAGGAACGCGCGACCGCCCGGGAGCTCTTCATCAAACAATGTGCGATCTGTCATGGCCCCGACGGGCGCGGCGATGGGCTTTCCTCGACGATCCTGGCACCACGGCCCACGGACTTCCACGAGGTCCGTCCCACGACGGCCCGCGCCGAGTCCGTCCTGGCCCTCGGGGTGCGAGGCACGGCGATGCCTCGCTGGACGGGCAAGCTCACCCCGGACGAGCAGAAGCTCCTGGCCCGATACGTCCGGTCCTTCTTCGGCAAGGAGTGA
PROTEIN sequence
Length: 875
MTTEARPSGAPPTIPALIRWHGYAALASVLYVAVLGLVMAIRFHAPDWLGDVPWLSWGRIRYAHTQGLFFGWLGNAFLAFLYFVVPRLAARPVTSVRLGWVLFAVWNGLLVLPGWALVQAGVSQPLEWAEFPLPVDGAATLGMLLAAGQFVVPLARARVPSLYVSAWYILGGLTFTLLAYPIGNVVPEFLPGAQGATFSGLWIHDAVGLFVTPLALAIAYAVIPSVSGRPIFSHFLSMIGFWLLFLLYPLNGTHHYVFSSIPMEAQKGAIVASVYLGADVVLVVTNLLLSLRGRSGIAASDAPLRYVWAGTVAYLIVSLQGSAQAIMPLNRFTHFSDWVIGHSHLAMIGFASFTALGGLLHAWRLTPGCRFNREAAGWSFWLLTIGLAGMVLDLTVAGVVQGQLWQGDLPWMESVRASAPFWWVRSISGSIVLIGFLAVVAAMTTGPLIAPAPVRQPDAESSQQPDAEEEIGGFRWLKNAYVLVAGAGFGLFAFSFVVLGLWPNRDLREQIARTRPTGSGAMSASEARGRLVYAREGCLNCHSQLVRFTEEDVRRFGPASQAWEGDGDAPQMWGTRRIGPDLAREGGRRPRDWQLAHLWNPRDVVPDSIMPGYRWLFDGSPTRPRPEAHDLVDYLESLGRDARLAGLSAPGPLPGRDPEEERREGMFCDCSIPRTAGKAPVWDLALAVGEAERFARRGAEVFSRDCAGCHGTAGRGDGPAAVALTPPPRDLALARFSERRLSDALWNGVRGSSMPPWNDLGAGDLRGLVAFLGTIAPAEPAPELKAEERATARELFIKQCAICHGPDGRGDGLSSTILAPRPTDFHEVRPTTARAESVLALGVRGTAMPRWTGKLTPDEQKLLARYVRSFFGKE*