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berkeley_reactor_200306_planktonic_scaffold_165720_57

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(67556..69007)

Top 3 Functional Annotations

Value Algorithm Source
UbiD family decarboxylase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8B4_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 445.0
  • Bit_score: 474
  • Evalue 6.50e-131
Mycobacterium llatzerense strain CLUC14 Mllat_contig000004, whole genome shotgun sequence {ECO:0000313|EMBL:KIU18186.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 482.0
  • Bit_score: 680
  • Evalue 1.40e-192
UbiD family decarboxylase similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 445.0
  • Bit_score: 474
  • Evalue 1.80e-131

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Taxonomy

Mycobacterium llatzerense → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1452
ATGGCGTTCAATGACTTCCGCGAATTTCTGGCCGCGCTCCGGGAGCGCGGCGAGCTCCTCGAGATCGAGCGTCCGATCGCGCTCGAGCTCGAGGTCGGGAAGGCCCTGCGGAAGTGCGCCTCGGTCTCCGGCCCGGCCCTCGTCTTCAAGAATAATGGAACGCAATTTCCCCTCGTGGGAGGCCTCTACAACACGCGGTCGAAGGCGCTCATCGCGTTCGAGTCGACCGAGGCCGAGGTCTTCGGCAAGATCCTCTCCGGGCTGGCGAAACGGACCCCGCCGGTCGTGATCGAGGACGCACCGGTTCATGAAAACGTGATCCTGGGCGACGCGATCGACTTGACCGCCTTGCCAGTCCCCCGATACAGCCCCGACGACGGCGGGCCGTACATCACGGCGGGGATCGTCGTCAGCAAGGATCCCGAGACGGGCATCCCCGACGTCGGCCACTACCGGTTCGAGATCATCGACAAGCGGACGATGTCGTTCCTCGCCCAGCCGAACCACCGCTTCGGCAAGCACATCGCCCGGGCGAGGGCGAAGGGGGCGACCAAGTACCGCGCGGCCCTGGTGATCGGCGTCGACCCGATCCTCGCCTACACGGGCCCGGTCCAGGTCCCCGACGACACCGACGACTTCGCGGTGGCGGGCGGCCTCCGAGGGGCACCGGTCGAGCTCGTGCGCTGCAAGTCGATCGAGGACCTCGAGGTCCCGGCCCGGGCTGAGTTCGTCATCGAATTCGAGATCGACTTCACCCAGACCGTGTTCGAGGGGCCGCTCGGCGAGTACACCGGGTTCTACACGCCCGGCTCCATGAAGCCGATCGCCCGGCCGCTCGCGATCACCCACCGCAACGACGCGTACTTCCAGGCCCTCCTCACCGGCGTCCCGCCGACCGAGAACCACACGCTCAAGCAACTGCCGTTCGAGGCGTCGTTCTACGCGATGATGAAGCCGCAGTTCCCCACCTTGGAACGGGTCGCGATACCGGCCTCGGGGGGTGTTTCATTCTATGTGATCATGTCGATGACGACGAGGTACGCCGGAGAGGCGAGGTCCGCGATCCTCGCGGCGATGTCGACGAACCTCCGGCCGAAGACGGTCATCGTGGTGGACCCGGACATCGACGTGCAGGACCCGACGCAGGTCGAGTGGGCGACGGCGTTCCGCACGCAACCGGCCCGCGACGTCATCGTCGTCGAGGGGTTGCCGGCGGGGCCGCTCGACCCCTCGGTCGACGACTCGATCCCGCTCGACGCCCGGCTCGGCTCGGCCCTGGGCATCGACGCGACCTTCCCGTTCGGCTCGGTCATCAAGAAGGCGGGCGAGGTCGCGTCGGCCGGCTCGGCGTGCGGCCCCTCCCTGGCCGACAAGGGGCACGAGTTCTTCGAAGTCGCCGACGTCCCGGGATGGCGGGAGTACGACCTCCCCGAGCTTCGGAACCGCGGATAG
PROTEIN sequence
Length: 484
MAFNDFREFLAALRERGELLEIERPIALELEVGKALRKCASVSGPALVFKNNGTQFPLVGGLYNTRSKALIAFESTEAEVFGKILSGLAKRTPPVVIEDAPVHENVILGDAIDLTALPVPRYSPDDGGPYITAGIVVSKDPETGIPDVGHYRFEIIDKRTMSFLAQPNHRFGKHIARARAKGATKYRAALVIGVDPILAYTGPVQVPDDTDDFAVAGGLRGAPVELVRCKSIEDLEVPARAEFVIEFEIDFTQTVFEGPLGEYTGFYTPGSMKPIARPLAITHRNDAYFQALLTGVPPTENHTLKQLPFEASFYAMMKPQFPTLERVAIPASGGVSFYVIMSMTTRYAGEARSAILAAMSTNLRPKTVIVVDPDIDVQDPTQVEWATAFRTQPARDVIVVEGLPAGPLDPSVDDSIPLDARLGSALGIDATFPFGSVIKKAGEVASAGSACGPSLADKGHEFFEVADVPGWREYDLPELRNRG*