ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_262938_12

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(17388..19394)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein id=4179828 bin=GWF2_Lentisphaerae_50_93 species=Trichomonas vaginalis genus=Trichomonas taxon_order=Trichomonadida taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S similarity UNIREF
DB: UNIREF100
  • Identity: 34.9
  • Coverage: 634.0
  • Bit_score: 367
  • Evalue 2.60e-98
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 535.0
  • Bit_score: 274
  • Evalue 5.00e-71
Tax=RBG_16_Planctomycetes_55_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 35.5
  • Coverage: 668.0
  • Bit_score: 375
  • Evalue 1.00e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Planctomycetes_55_9_curated → Phycisphaerae → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 2007
GTGATCCCCTCGAGAGTGCGACGATGCGCGATCTGTCTGATCCCCGCGGTCCTATTGGCCGTGTGCCCGGCCCAGGCCCAGGACGGGCGAAACGTCTCGGGCGGGATCCATGAGATTGCGAATCACCGCCTGACGCTCCAGTTCGACGAGAGGGTCGGGATCGTCAAGATCAAGGACCGTCGCTCGGGCAACGAATGGAGCGAGGCGTCGACCTTGGCAGGCTTCCGCCTGACCCGGAGGCCTGAAGTCGGGCGTGGGGGCCTCACGCTGGGGCTGGTGCACAAGGGTACGGGCTTCGCGTTCTCCGCCCGATACGCGTTCGACGAACAGGACCCCGACAGGCCGGAGGTCGTCGTCACGATCCTCCCCGGGGGCGGGGGCCCGGACGCCGAGATGGCGAAGAACCTCTACTATCCCCCGCCGATCTCCACCGCCGTGGGCGATCGGCTCGTGCTGCCCATGAATGAAGGCATGCTGTTCCCCGTCGACGATCCGGGCGTGCAGCCGCCCCAGTTCCTGCGTTTCTTCAAAGGCCTCGACTTTTCGATGCGATGGATGGGCCTCGTGAAGTCGCCCGGGGGGGCCGGGATCCTCACCCTCATCGAGACCCCCGACGATGCGGCGGCCCTCGTCTTGCGCGAGGGGCCCCACGCGGAGGGGGCTCCCGGCCTGCTCACCGCCGGCCCGATCTGGATGCCCTCGCTCCGATCGCTTAAATATGAGCGGACCTTGCGCTACGTCCTCTTCGATCGGGGGGGATACGTCGCACAGGCCCGTTGGTTCCGGGAGTACGCGAAGGCGAACGGCCTGTGGGAAAGCCTCGCCAACAAGGCGACGCGCAAGCCGAACGTTCAGAAGCTGCTGGGCGCGGCGAACGTCTGGGCCTTGGTCCGGGATCCGGTCCACGTCGCCCGGGAGATGAGGCAGCTCGGCATGGATCGGGTGCTCTGGTCCAACACCGTCCATCCCGGCGACATCGCCCGGATCAACGAGATGGGCTATCTCACCAGCCGATATGACAATTATCAGGATCTCTATCAGCCGGGCGTGTACGAGGGCCTCACCGTGGAGGATCCCAAGGCCGTCATCGTGCAGGAGGACGGCACCCCCGCGCCCGGCTGGACGGTCAAGCCGAAGCGAGGCCCTTCGCACCCGGGGCTCATCGACTGCCCGGCCCACGCGTTGCGCCGGGCCGAGGCGACCCTGCCGGGTCGCCAGCGGACCCACCCCTACACGGCCCTGTTCGTAGACGAGACCACGGCCACTGCGTGGCCGGAATGCTACGACCCGGCGCACCAGGCCATGAAGCTCCATCCCCATCCTCGGCTCTCCCGCTCCGAGTCGAAGGTGTTCCGGCTCGGCCTGATCCGGTACGTCGGCGCGAGCCTGGGACTCGTGGTCGGCTCGGAAGACGGCATCGACGCGGGGGCCCCCCTGCTCGACTACGTCGAGGGGATGGCCAGCTACGCCCCCAACAACATCATCGGGGATTACGCCGACGCCAAGTCCGAACCCGTCCCCGACTCCGAGGTCTCGACCGAGTACCGCCGCCTCTGCCTGCCCTATTACCAAGGCCACGCCTATCGGATCCCCCTCTGGGAGCTGGTGTATCACGACTCCGTCGTCGTCTTCCCCCACTGGACCGACTACGCCAGCCGCTTCTCCCCGTCCATCTGGGAACAGAAGGACCTGCAATACATCCTCTACGGCACCCAACCGATGTACCTCTTCAAGGACGAAGCCTGGGCACGGCAGAAAGAGGCGATCGCGACGAGCTACCGCAACGTCACTTCCGTCTCGCGCATCGTGGCGGGCCACGAGATGGTGGACCACATGTTCCTGAACAAGGAGGGGAGCGTCCAGCGCACGCGCTGGGACAACGGGGGCGACGTCATCGTGAATTTCGGCGACACCCCGTTCCACGACGGGACGGTGCAGGTGGGGCCGAAGAGCTTCCGGTGCGTCGGGATGCCGGGCTTCGTCGCCCCTCCCGGGGCGAAACCTTGA
PROTEIN sequence
Length: 669
VIPSRVRRCAICLIPAVLLAVCPAQAQDGRNVSGGIHEIANHRLTLQFDERVGIVKIKDRRSGNEWSEASTLAGFRLTRRPEVGRGGLTLGLVHKGTGFAFSARYAFDEQDPDRPEVVVTILPGGGGPDAEMAKNLYYPPPISTAVGDRLVLPMNEGMLFPVDDPGVQPPQFLRFFKGLDFSMRWMGLVKSPGGAGILTLIETPDDAAALVLREGPHAEGAPGLLTAGPIWMPSLRSLKYERTLRYVLFDRGGYVAQARWFREYAKANGLWESLANKATRKPNVQKLLGAANVWALVRDPVHVAREMRQLGMDRVLWSNTVHPGDIARINEMGYLTSRYDNYQDLYQPGVYEGLTVEDPKAVIVQEDGTPAPGWTVKPKRGPSHPGLIDCPAHALRRAEATLPGRQRTHPYTALFVDETTATAWPECYDPAHQAMKLHPHPRLSRSESKVFRLGLIRYVGASLGLVVGSEDGIDAGAPLLDYVEGMASYAPNNIIGDYADAKSEPVPDSEVSTEYRRLCLPYYQGHAYRIPLWELVYHDSVVVFPHWTDYASRFSPSIWEQKDLQYILYGTQPMYLFKDEAWARQKEAIATSYRNVTSVSRIVAGHEMVDHMFLNKEGSVQRTRWDNGGDVIVNFGDTPFHDGTVQVGPKSFRCVGMPGFVAPPGAKP*