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berkeley_reactor_200306_planktonic_scaffold_342522_15

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 15800..16879

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus retraction protein PilT id=3730157 bin=GWF2_Planctomycetes_50_10 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 346.0
  • Bit_score: 385
  • Evalue 3.90e-104
twitching motility protein similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 361.0
  • Bit_score: 315
  • Evalue 1.10e-83
Tax=GWF2_Planctomycetes_50_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 346.0
  • Bit_score: 385
  • Evalue 5.40e-104

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Taxonomy

GWF2_Planctomycetes_50_10_curated → Phycisphaerae → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1080
ATGACCTGGACCCTCGATCGGATCCTGAAGAATGCCCGGAAATTCGGGGCCAGCGACGTCCACCTCATCCGGGGGATCTCGCCCGCGTACCGCATCAATGGCGAGATCCGCCTGATCGACGGGGACGCCCTCGAAGAGGAGAACCTCCGGGGGATCTTCGAGGGACTTCTGGGCGAGAAACATCGCGAGATCTTCGCGAGGGACTGGCAGCTCTGCTTCTCACGCTACTGGCCGGAGGTCGGTCGCGTCCGGGCCAGCATCTACCTCCACGCCGGCATCCCCGAGATGGCGATCCGGCTCGGCGAGACGGCGATCCGCTCCCGAGAGGAACTGGGGCTGCCGACGATCATCGACGAGTTGGCCCGACTCCCGAACGGGCTGATCCTCGTCACCGGGGCCACCGGCAACGGCAAGACGACGACGCTCAACTACATCATCGACCTCATCAATCGAAGCCGGAGGGCCAAGATCATCACGATCGAGGACCCCGTCGAATATGTCCACAAGAACCAGAGCAGCATCATCGTCCAGCAGGAGGTCTTCACCGACACCCCGTCGTTCCAACAGGCGCTGACGCACGTCCTCCGCCAGGACCCCGACGTCGTCGCGATCGGCGAGCTCAGGGATCTCGAGACCATGTCGACCGCCCTGACCGCCGCCGAGACCGGGCACCTCGTCCTCGCGACTCTCCACACGCCCGACACGGTCCAGACCATTCAGCGCATCTTCAGCGTGTTCCCGCACGAGCAGCAAAACAACATCATGTATCAATTGGCGAACACCATCCAGGCCATCGTCGCCCAGCGGCTCCTGCCCAAGGCCGACGGCAAGGGCCAGTTGCTCGCCTGCGAGGTCTGCATCGCCACCCCGGCCGTCCGGAAGCGGATCCGAGAAGGGGAGCCCCACCTCCTCTTCAGCGAGATGCAGATGGGCAAGAAGCACCAGATGCAGACGATGGACGCCGTGGTCCTGGACCTCTACCAGCGCGGGGAGATCACCTACGACATCGCCATGTCCAACGCCCGAGAACCCGAAGCGATCCGCCAGCGCTCGGCCGGCGTGCCCCGCAAGCCCATGTAA
PROTEIN sequence
Length: 360
MTWTLDRILKNARKFGASDVHLIRGISPAYRINGEIRLIDGDALEEENLRGIFEGLLGEKHREIFARDWQLCFSRYWPEVGRVRASIYLHAGIPEMAIRLGETAIRSREELGLPTIIDELARLPNGLILVTGATGNGKTTTLNYIIDLINRSRRAKIITIEDPVEYVHKNQSSIIVQQEVFTDTPSFQQALTHVLRQDPDVVAIGELRDLETMSTALTAAETGHLVLATLHTPDTVQTIQRIFSVFPHEQQNNIMYQLANTIQAIVAQRLLPKADGKGQLLACEVCIATPAVRKRIREGEPHLLFSEMQMGKKHQMQTMDAVVLDLYQRGEITYDIAMSNAREPEAIRQRSAGVPRKPM*