ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_80596_18

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 13535..14779

Top 3 Functional Annotations

Value Algorithm Source
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) similarity KEGG
DB: KEGG
  • Identity: 26.8
  • Coverage: 209.0
  • Bit_score: 69
  • Evalue 1.50e-09
SH3 type 3 domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS60_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 426.0
  • Bit_score: 246
  • Evalue 3.20e-62
SH3 type 3 domain protein {ECO:0000313|EMBL:EEF57315.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.2
  • Coverage: 426.0
  • Bit_score: 246
  • Evalue 4.50e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1245
ATGAAAAAAAATTGCTGGTTGATTCTGGGAACATTGGTTGCCACCAGTGCCGTGGCGCAGGTAAACACAAACGCGTTGCCGGAAATTCCCGCTCCGGCGGGTTCCCCCGAAACCCCCGCCGCGATGGACACCGCCGCTCCGGCTGCGGCAACGACTCCGGCTCCGACGGCGGCTCCGGTGAAGAAGGCCGCCGCCAAAAAGAAACATGTGGTCAAGCCGCTGCACGAACCAACCGTGTCGCTCACTCCCGGTGAAGCGGTGGTGACGGCGCATCACTTGAATGTCCGGGGCCAGGCCGGCATGCGCGGCGAAGTCATTGGCAAACTGGACCGCGGGCAAATGGTGACGGTGCTGACCCAGATCAATCTGGACAAACACGCGGCGGACGAACCCGCACAGTGGGCGAAGATTGCCCTGCCTGCCGATGTCAAAGTGTGGGTAAGTTCCCACTTCGTGGACAAGACGAGCAAAACCGTCACCGCCAAACGGCTCAACCTGCGCGCCGGTCCCGGCGAAAATTTCAGCGTCGTCGGCACGATTGAACACGGCGCGCCGGTGACCGAAATCGCCAGCAAGGGCAGTTGGATCGAGATTCAGCCGCCGACGGATTCCTTTGCCTTTGTCGCCGCCATGTATCTCGATCAGACGGCGATTGCCGGCACGCAAGGTGCGGGGCAAAGCCCGGCTCCCGGAGCTTCGCAGGGAACCATGATTGCCGCCGCGCCGGCGATGACGCAAGCGGCGCCTGCCAACCCCCCGCCTGCGCCCGCGACGGAAACGCATGCGGTGGTGGTGCCTCCGCCCGGCAATGTGCAGCCGGCGCAACCGATGACTGCCTCCACGGAAAGCGGCACGGCGGGCATGGGCATGACGGAAACGCCCGGCTCGTTGGTGGTGAACACCAATCCGCCGCCGCCCCGGGTGGCCACGCACGAGGGCTATGTTCGCTCCTCGGTCAGCCCCGTTGCGCCGACCGCTTACGAACTTTATGACCCGGCCACCGGCAACGCGATTAATTACCTGAATTCTCCCACCAAAAACCTGGACTTGTCCCGCTACGACGGCACGCGAATTATTGTGACGGGTGAAGAAGGTCTGGCGGCGCGCTGGGGCGGAACGCCCGTGATGACGGTGCAACGGATTTATCTGGTCAGCACCAACCCGCCCGTGCCCTTCGAGCGCGTCATGAGCCCCCGCGCCAGCCAGAAAAACATTCCCGGCACCAAGCGTGAAAAACATCATTGA
PROTEIN sequence
Length: 415
MKKNCWLILGTLVATSAVAQVNTNALPEIPAPAGSPETPAAMDTAAPAAATTPAPTAAPVKKAAAKKKHVVKPLHEPTVSLTPGEAVVTAHHLNVRGQAGMRGEVIGKLDRGQMVTVLTQINLDKHAADEPAQWAKIALPADVKVWVSSHFVDKTSKTVTAKRLNLRAGPGENFSVVGTIEHGAPVTEIASKGSWIEIQPPTDSFAFVAAMYLDQTAIAGTQGAGQSPAPGASQGTMIAAAPAMTQAAPANPPPAPATETHAVVVPPPGNVQPAQPMTASTESGTAGMGMTETPGSLVVNTNPPPPRVATHEGYVRSSVSPVAPTAYELYDPATGNAINYLNSPTKNLDLSRYDGTRIIVTGEEGLAARWGGTPVMTVQRIYLVSTNPPVPFERVMSPRASQKNIPGTKREKHH*