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berkeley_reactor_200306_planktonic_scaffold_190120_71

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(95882..96970)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPR6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 350.0
  • Bit_score: 476
  • Evalue 1.70e-131
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EEF58189.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 350.0
  • Bit_score: 476
  • Evalue 2.30e-131
oligopeptide transport system permease protein AppC similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 350.0
  • Bit_score: 371
  • Evalue 1.60e-100

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1089
ATGAACACTGCCACGCCAACGCAAAATCCGAACGTCCAGCAGCCGCTGTCACCGTGGCAGTTGTTCTGGCGCCGGCTCAAGCGCCGGCGCGTGGCGATGGCGGGCGGAGTGATTCTGATTGGACTTTACGCCATCGCGCTGTTGGCCGGTTTCTTCGCGCCGTATCGCTATGATCGGATAGACAAAAACGGGTTCTTCCATCCGCCCACACTGCCGCGATTGCAAGGCTTTCATCTGGTGGTGCCGCGTTATGAAAGCAAACCGGGCAGTTTCGATTATCATCTGGTGCCCGATGACGTGAAGCCGATTCACTTCTTTGTCGAGGGCGAGAAGTATAAATTGTTCGGCTGTATTCCGGCTTCGCGGCATTTCTTCGGCACCGGTGATCCGGCTTATCCGGTTTATCTGCTCGGAGCTGATCAGTTTGGCCGCGACGAATTATCGCGCCTGCTCTATGGCTCGCAGATTTCGCTTTCGATCGGCATCGTCGGCATTTTGTTGTCCTTCTCGTTTGGCATGATCCTGGGCGGCATCTCGGGATATTTCAGCGGCCGCACCGACACGATCATCATGCGCGTTTGCGAATTGATCATGTCCATTCCCGCGCTATATCTCATCATTTCCCTGCGCGCCACGTTTCCGCCGGGCATGAGTTCCGCCGAAGTCTATGCGATGATTGTCGTCATCCTCAGTTTCATCGGCTGGGCCGGGATGGCGCGCGTGATTCGCGGCATGGCGCTGTCGTTGCGCGAACAACAGTTCGTGCTCGCCGCCCGTGCGCTTGGGCAAACGCACCTGAACATCATCGTGCGCCACATCCTGCCGAACACGTTTTCCTACGTCATCGTCGCAGCGACGTTGAGCGTGCCGTATTACATCCTCGGCGAAGTCGTCCTCAGTTTTCTCGGCGTCGGCATCCAGGAACCGAGCGCCAGTTGGGGCAACATGCTCACCGCCGCGCAAAACATCGAATACCTACGCAGCTACCCGTGGCTGCTCGCGCCTGGCGCGGCGATCTTCATCACGGTGCTGGCGTTTAATTTTCTCGGCGACGGCTTGCGCGATGCCGCGGATGCGAAATCCAATTGA
PROTEIN sequence
Length: 363
MNTATPTQNPNVQQPLSPWQLFWRRLKRRRVAMAGGVILIGLYAIALLAGFFAPYRYDRIDKNGFFHPPTLPRLQGFHLVVPRYESKPGSFDYHLVPDDVKPIHFFVEGEKYKLFGCIPASRHFFGTGDPAYPVYLLGADQFGRDELSRLLYGSQISLSIGIVGILLSFSFGMILGGISGYFSGRTDTIIMRVCELIMSIPALYLIISLRATFPPGMSSAEVYAMIVVILSFIGWAGMARVIRGMALSLREQQFVLAARALGQTHLNIIVRHILPNTFSYVIVAATLSVPYYILGEVVLSFLGVGIQEPSASWGNMLTAAQNIEYLRSYPWLLAPGAAIFITVLAFNFLGDGLRDAADAKSN*