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berkeley_reactor_200306_planktonic_scaffold_204825_3

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 1376..1975

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA015-O19 RepID=UPI000364C542 similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 194.0
  • Bit_score: 268
  • Evalue 2.90e-69
putative pyruvate dehydrogenase E1 component subunit alpha similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 167.0
  • Bit_score: 97
  • Evalue 3.30e-18
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 199.0
  • Bit_score: 294
  • Evalue 9.10e-77

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGACTGCCCAGGAACTGATCGCCTTTGAGTCGGAGATTGCGGCTGAATTCAATGCCGCCAAAATCCGCGCGCCCATTCATCTTTATTACGGCAATGAGGAGAAGATGATTGAGATTTTCCGCGATGTGAAGCCGGACGACTGGGTGTTTTGTTCGTGGCGCAGCCATTACCAATGCCTGCTCAAAGGCGTTCCGCCGGCGGAGTTGAAGGCGGAGATCATGGCCGGCCATTCCATTTCACTTTGCTTTCCCAAACAGCGCATCGTCTCGTCAGCCATCGTTGGTGGCATCATTCCCATCGCGGTCGGCACGGCCTTGAGCATCAAGCGCAAGGGCGAGAAGAACATGGTGCATTGCTTCGCCGGTGAGATGACTTCGGAAACCGGCATCTTCCACGAGGCGGTGAAATATTCCCACAATCACAAGCTGCCCATCCGTTTCATCGTCGAGGACAACGGCAAGTCCGTGTGCACCGACACCCGCGAGACGTGGGCGCAACCGACGCTCACCTACGAGAACAACAGCCATCCCCTGGTGATGTTCTACCAATACGAAACCAAGTATCCGCACGCCGGAGCCGGCCAACGGGTTCAATTTTGA
PROTEIN sequence
Length: 200
MTAQELIAFESEIAAEFNAAKIRAPIHLYYGNEEKMIEIFRDVKPDDWVFCSWRSHYQCLLKGVPPAELKAEIMAGHSISLCFPKQRIVSSAIVGGIIPIAVGTALSIKRKGEKNMVHCFAGEMTSETGIFHEAVKYSHNHKLPIRFIVEDNGKSVCTDTRETWAQPTLTYENNSHPLVMFYQYETKYPHAGAGQRVQF*