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berkeley_reactor_200306_planktonic_scaffold_220752_50

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(62993..66535)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000255|HAMAP-Rule:MF_01452}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01452};; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_01452};; ATP-dependent helicase/nuclease AddB {ECO:0000255|HAMAP-Rule:MF_01452}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.8
  • Coverage: 1242.0
  • Bit_score: 505
  • Evalue 1.20e-139
ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=ADDB_HELMI similarity UNIREF
DB: UNIREF100
  • Identity: 32.8
  • Coverage: 1242.0
  • Bit_score: 505
  • Evalue 8.40e-140
addB; ATP-dependent nuclease subunit b similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 1242.0
  • Bit_score: 505
  • Evalue 2.40e-140

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Taxonomy

Heliobacterium modesticaldum → Heliobacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3543
GTGCAAACGCGTTTTCTTCTCGGCCCCGCCGGCAGCGGCAAAACCTTCCACTGCCTGGGCGAAATCCGCGACGCGTTGCGCCAGTCGCCCGACGGCCCGCCGCTCATCCTGCTCGCGCCCAAGCAGGCCACGTTTCAGCTCGAACGACAATTGCTGGCCGATCCCACCCTCTCCGGCTTCACCCGGCTGCACATTTTCTCCTTCGACAAACTGGCGCGCTTCGTTCTGGAACAATTGAACGTCGCGCCGCCGGCGCTGCTTTCCGGCGAAGGCCGCGTGATGGTATTGCGCGCCCTGTTGATGCGGCAGGAAGCCGAGTTAAAATTGTTCGGCCGTAGCGCGCGGCGGCCCGGTTTCGCCCAGGAATTGAGCGGCTTGCTGGCGGAATTGCAGCAACATCAGTTCACGCCCGCCAAACTGCGCTCGCTGGCCGGCAACGAAAAACTTTCCCGCGAACTCCGCCACAAACTCGACGACCTTGCCCGGCTGCACGAAGCGTATTCGCGCTGGCTGACGGAACATCAGTTGCAGGACGCCGATTGTCTGCTCGAACACGCCATCGCCGCGCTGGCAACTTCCGGCGGGGCGTCGCCACTGCGCTTTCAGCAGCTCTGGCTCGACGGTTTCGCCGAAATGACGCCGCAGGAACTCGCCCTGCTCGCCGCCGTCGTTCCGCTCTGCCAACGTGCCACGCTGGCGTTCTGCCTGGAAACCGAGCCCACGCCGGAAACGTCCTGGCTTTCCATCTGGTCGTCCATCGGCAAAACCTTCCAGCAATGCCGCGCCCAAATCGCCAACTTGCCGGGTTGCGAAGTGGCCGTCGAAATTTTGCAGCGCGTTCCCGCCGCCAGCCGGTTCACCGCAGATTCGCCGCTGGCCGAGCTGGAGCAAAACTGGTCGTTACTCGTTCACAACGCGGAGCGCCGGAGCCAGGAACCGGAAACCAGCGCGTCGACGGATAACATTCAGATCACGCTCTGCGCCAATCCCGAGGCCGAGGCCGCGTTTGCCGCGCGCGAAATTTTGCAATTTGTTCGCGCCGGCAACGGGAGACGCTTTCGCGATTGCGCCGTGCTGGTGCGTCATCTCGACGATTATCACAAGCCGCTCGCCCGCGTGTTTCGGCGCTACGGCGTCCCGTTTTTTCTGGACCGGCGCGAATCGGTCACGCATCACCCGCTGGCCGAATTGACCCGCAGCGCCTTGCGCACCGTCGCCTTCGACTGGCAGCCGGACGACTGGTTCGCCACGCTCAAAGCCGGCTTCGCGCCGGTGTCCGAAACCGAAATTGACCGGCTGGAAAATGCCGCGCTGGAATTCGGCTGGCGCGGCAAAAAATGGCACGAACCGTTGCCGGACGACGCCAGCGAACGGCTCCGCAAAATCCTCCTGCCGCCGTTTGAAAAACTGGGGGCGCGGCTGACCGGCAAAAATGCGTCGCCAACCGGCGGGCAACTGGCCGGCGCCTTGCGCGCCCTGTGGACCGACTTGCGCGTGGAATCCCAATTGCAAGCGTGGAGCGATGAAACGTCCGCCGCGCCGGCGCAGCCAGCGTTCAACGCGTCCACGCATGCCTCCGTTTTCGAGCAGATGAACGCGTGGCTGGACAATCTCACGCGCGCGTTTCCTCACGAGCCGCTGCCGCTGCGCGAATGGCTGCCGATTCTCGAAGCTGGCCTGGCCGGGCTGACCGTTGGCGTGATTCCGCCCGCGCTGGACCAGGTGCTCATCGGCGCAATTGACCGCGCGCGTAATCCGGATTTGAAATTCAGCCTGGTGCTGGGCGCAAACGAATCCGTTTTTCCCGCGACGCCGGCCGCGCCGGCCATCCTCACCCACAGCGACCGCGACGAACTGGAAACGCAAAACGCGCTGCTCGGCCCCGGCCTGCCCGACCGCGTTTCGCGCGAACGGTATCTCGGTTACATCGCCTGCACCCGCGCCAGCGAACGGCTCGCGCTGGTTTTTTCGCGGCAAAGCGCCGACGGCAAAACGCTGAATCCGTCGCCGTTCATCAGCCATGTCCAAAAGATTTTTCCCGCGCTCGCCGTCGAGGAATTTGCCGGCGCCCACGATTGGCGTGAGGCGGAACATGTTTGTGAATTGACGGACATGCTGGTTGTTCGAGATGCCCCTCACCCCGGCCCTCTCCCCTCCGAGGGGCGAGGGGGAAACGTTCCCCGCACTTTGCTGGATCAAAACGCGGCGCTGGATCAGGTCGCGTTGAACACTCCAGAAACGGACGCAGGCTGTTCCCTCTCCCATCGGATGGGAGAGGGTCAGGGTGAGGGAAAAATTCCGCATATTTCAAAACTGCTCGAAATCCCCGCTCTCCAATCACTCGCCGAAAGGCTCGCCGCCTTGCGCGAGCCCGCTGAAACCGAAAATCTTTCCCCCGCGCTGGCGGCCAGGCTTTACGGCCCGGTCTTGCGTTCGTCCGTCAGCCGGCTGGAGGAATTCGCGGAATGTCCGTTCAAATTCTTCGCCCGCTCGGGCCTGCGCGCCAGCGAACGCAAAGTGTTTGAACTCGACGCCCGCGAGCGCGGCAATTTCCAGCACGATGTGCTGAAGGAATTTCACGAGCAACTCACGCGCGCCGGCAAACGCTGGCGCGACTTGACGCCCGTTGAAGCCCGCGAACGCATTGGTCAAATCGCCACGGCGCGCCTGCCGGATTTTCGTGACGGACTGTTTCGCGATTCAGCGGAAACCTTGTTCGCCGCCCGCGCCATGACGAGCGCGTTGCAGGATTTTGTGGAAGTCATCGTCGGCTGGATGCGCGAACAATATGAATTTGATCCGGCGGCCGCCGAACTGGGCTTTGGCGGCAAGGACGATCCCGCGCCCGCCTGGGAAATGGATTTGGGCGACGGCCGCAAACTTGCGCTGCAAGGCCGGATTGACCGCGTGGATTTATGGCGCGAGCCGCACGGCGACACCGCGCTGGCGGTGGTGACGGATTACAAGTCCGGCGGCAAAAAACTCGATCCGCTGCTCGTGGCCAACGGCGTGCAACTGCAATTGCTGGCGTATCTCGGCGCGTTGCGGCACTGGCAAAAGCCGGACGCAACCTTTGGCGCCAAGAGCATCCAGCCGGCCGGCGCGTTTTACGTCAGCCTGCGCGGCAAGTTTGAAGCGGGCGACACGCGGGATGAAATTTTGGACGACCGCGAAGCGAAGAAGCTCGCCTACCGCCACAACGGACGCTTCGATGCCGGCCACTTGCGAAAGCTGGATCGGCGTCCGGACGCCACCAAGGGCGACCAGTTCAATTATCGTTTGAACAAGGGTGGCGAATTGTCGTCCAATTCAGCGGAAGGATTAAGCGGCAAGGCATTCGCCGGCTTGCTCGACAACATCGAGGCACAGTTGCGTGCTCTCGGCCAAAGCATATTCGCCGGCGACGCGCAGGTGGATCCGTATCGCAAAGGCAAAATGACGCCGTGTGAATACTGCGATTATCGCGCCGCCTGCCGGATTGACGAATGGACGCACTCCTGGCGGATGCTGCGCGCGAATGAAAAATCATCCTCATCGTCATGA
PROTEIN sequence
Length: 1181
VQTRFLLGPAGSGKTFHCLGEIRDALRQSPDGPPLILLAPKQATFQLERQLLADPTLSGFTRLHIFSFDKLARFVLEQLNVAPPALLSGEGRVMVLRALLMRQEAELKLFGRSARRPGFAQELSGLLAELQQHQFTPAKLRSLAGNEKLSRELRHKLDDLARLHEAYSRWLTEHQLQDADCLLEHAIAALATSGGASPLRFQQLWLDGFAEMTPQELALLAAVVPLCQRATLAFCLETEPTPETSWLSIWSSIGKTFQQCRAQIANLPGCEVAVEILQRVPAASRFTADSPLAELEQNWSLLVHNAERRSQEPETSASTDNIQITLCANPEAEAAFAAREILQFVRAGNGRRFRDCAVLVRHLDDYHKPLARVFRRYGVPFFLDRRESVTHHPLAELTRSALRTVAFDWQPDDWFATLKAGFAPVSETEIDRLENAALEFGWRGKKWHEPLPDDASERLRKILLPPFEKLGARLTGKNASPTGGQLAGALRALWTDLRVESQLQAWSDETSAAPAQPAFNASTHASVFEQMNAWLDNLTRAFPHEPLPLREWLPILEAGLAGLTVGVIPPALDQVLIGAIDRARNPDLKFSLVLGANESVFPATPAAPAILTHSDRDELETQNALLGPGLPDRVSRERYLGYIACTRASERLALVFSRQSADGKTLNPSPFISHVQKIFPALAVEEFAGAHDWREAEHVCELTDMLVVRDAPHPGPLPSEGRGGNVPRTLLDQNAALDQVALNTPETDAGCSLSHRMGEGQGEGKIPHISKLLEIPALQSLAERLAALREPAETENLSPALAARLYGPVLRSSVSRLEEFAECPFKFFARSGLRASERKVFELDARERGNFQHDVLKEFHEQLTRAGKRWRDLTPVEARERIGQIATARLPDFRDGLFRDSAETLFAARAMTSALQDFVEVIVGWMREQYEFDPAAAELGFGGKDDPAPAWEMDLGDGRKLALQGRIDRVDLWREPHGDTALAVVTDYKSGGKKLDPLLVANGVQLQLLAYLGALRHWQKPDATFGAKSIQPAGAFYVSLRGKFEAGDTRDEILDDREAKKLAYRHNGRFDAGHLRKLDRRPDATKGDQFNYRLNKGGELSSNSAEGLSGKAFAGLLDNIEAQLRALGQSIFAGDAQVDPYRKGKMTPCEYCDYRAACRIDEWTHSWRMLRANEKSSSSS*