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berkeley_reactor_200306_planktonic_scaffold_220752_366

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(445329..446174)

Top 3 Functional Annotations

Value Algorithm Source
putative dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133) similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 274.0
  • Bit_score: 235
  • Evalue 1.10e-59
dTDP-4-dehydrorhamnose reductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ08_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 281.0
  • Bit_score: 303
  • Evalue 1.50e-79
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EEF60235.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 281.0
  • Bit_score: 303
  • Evalue 2.10e-79

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 846
ATGATTTGGATCACCGGGGCGAACGGGCTGATTGGAAACCAGCTGGCCCTCGCCGCCGAAAAACTGGCGCCGAACCATTCCGTCCGCAGGCTGACGCGGGCGGATTTCGATCTCCTGGATTTTTCCGTCGTCGCAAAGGAATTTGCCAAAGACCAACCGTCGGTCGTCATTCACTGTGCCGCCATCACCAGCGTCGCCGACGCGCAAAAAAATCCCGGACTCGCGAAACGTGTGAATGTCGAGGCGACCCGATTGCTGTCGGAACTGGCCGCCGGTTCCCAGTTCGTTTTCTTTTCCACCGACCTGGTTTTCGATGGCCGAAAGGGAAACTACACCGAAACGGACACGCCCAATCCGCTGCATCTCTACGGCGAAACCAAGCTGGCCGCCGAGGAACTGGTTTTGAAAAATCCGCGCCATCTCGTGGTGCGCACGTCCATCAACGGCGGCACGTCGCGCGCCGGCAACCGGGCTTTCAACGAGCAGTTGCGGCGTTCGCTGGCAGGAGCGGGGCAGGGAATGACCTTGTTCACGGATGAATTCCGCTCGCCGATTCCGGCGGTGGAAACGGCCCGCGCCGTTTGGGAACTGGTTGAGAAAAATTGCGCGGGAATGTATCACGTCGCCGGCGCGGAAAAATTGTCGCGTTTTCAGATTGGTGAATTACTGGTCAAACACTGGCGCGTTTCGCCGGCCAAGTTTCAAGCCGGATCGGCCAGGGATTTTCCAGGCCCGGCGCGTGCGCTGGACACGTCGTTAAACATTTCCCGGGTGCAGTCCGTCTTGTCCGCTCCTTTGCCGGGGCTGACGGAATGGCTGGCGAATCATCCCCAAGTTCCGTTCTAA
PROTEIN sequence
Length: 282
MIWITGANGLIGNQLALAAEKLAPNHSVRRLTRADFDLLDFSVVAKEFAKDQPSVVIHCAAITSVADAQKNPGLAKRVNVEATRLLSELAAGSQFVFFSTDLVFDGRKGNYTETDTPNPLHLYGETKLAAEELVLKNPRHLVVRTSINGGTSRAGNRAFNEQLRRSLAGAGQGMTLFTDEFRSPIPAVETARAVWELVEKNCAGMYHVAGAEKLSRFQIGELLVKHWRVSPAKFQAGSARDFPGPARALDTSLNISRVQSVLSAPLPGLTEWLANHPQVPF*