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berkeley_reactor_200306_planktonic_scaffold_235821_2

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 360..1322

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00038292B3 similarity UNIREF
DB: UNIREF100
  • Identity: 42.1
  • Coverage: 292.0
  • Bit_score: 216
  • Evalue 2.10e-53
Uncharacterized protein {ECO:0000313|EMBL:EEF60054.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.3
  • Coverage: 287.0
  • Bit_score: 164
  • Evalue 1.30e-37
prepilin-type N-terminal cleavage/methylation domain similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 261.0
  • Bit_score: 99
  • Evalue 1.10e-18

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 963
ATGTTCAATGCCCGCCCCGTGAAACTCCTGCTAAATTCAACTTGCAATCCCAATCACATGACAGCAAAACACCCATTTTCATCCACCCCCGGAGCGTCTGCGCGAGGGTTTACGTTGATTGAGCTTCTGGTGGTCATCGCGATCATTGGCATCCTGGCGGCGATGCTGCTGCCGGCGCTGGCCAAGGCCAAGTTGAAGGCAACGGAGGCAACGTGTTTGAGCAACCAAAAGCAGATTCTTTTGGCGGCCATCATGTATTCCGGGGACAACAACGACAAAATCGTGACGACGCCGTCAATCAACAATCAAATCGTCTCGGCGGGTGGTTTTTGGAATGCGTATTCGGCTGCATTGAGACAAGCAGCGCCGTGGAATCAAAGCGGTGTCACGGCCGACAAGGCGCAGGCCTGGCTGGAGCAAACGTTGTCTTCGAGCGTAAACAATCCCTTGGCCGCTTATGCGCGCAATGCCGGCGTATATCATTGTCCGGGCGACGTGCGCATCCGCAACACGCCCGGCAAAGGCTGGGCTTACGACAGTTACTCCAAGTCGCAGAACATGCAGGTGACCACATCGGGCAACGATTGGGGCTTCAACCCCGGCAACAGCAAATTGTCTCAATTGGGGAACGCCTCGCAAACCATGTTCTTTGTCGAAGACACCGACAATCGCGGTTACAACAACGGCACCTGGACGGTGCGCTGGAACGGCACGCCGAACGAGCCGTTCAGCTGGGTGGATCCGGTGGCGATCTATCATGGCAACGTGGGCACCTTTGGCTATGCGGACGGTCATTCCGAGGGGCATAAGTGGCTGGATTCAGCCATCGTCAGTTACGCCAAGCTGGTTTCCCAGGGAGTTGCCACTCCCAGTTCCAGTTATCTGTCGAGTAATGGCGCCAAAACCTCCGGCCCGGATTATGAATACATTCATCAAGGCATTCGTTTCAAAGGCTGGCAATGA
PROTEIN sequence
Length: 321
MFNARPVKLLLNSTCNPNHMTAKHPFSSTPGASARGFTLIELLVVIAIIGILAAMLLPALAKAKLKATEATCLSNQKQILLAAIMYSGDNNDKIVTTPSINNQIVSAGGFWNAYSAALRQAAPWNQSGVTADKAQAWLEQTLSSSVNNPLAAYARNAGVYHCPGDVRIRNTPGKGWAYDSYSKSQNMQVTTSGNDWGFNPGNSKLSQLGNASQTMFFVEDTDNRGYNNGTWTVRWNGTPNEPFSWVDPVAIYHGNVGTFGYADGHSEGHKWLDSAIVSYAKLVSQGVATPSSSYLSSNGAKTSGPDYEYIHQGIRFKGWQ*