ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_32010_4

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(3917..4531)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EPA3_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 31.5
  • Coverage: 168.0
  • Bit_score: 102
  • Evalue 3.70e-19
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 31.5
  • Coverage: 168.0
  • Bit_score: 102
  • Evalue 1.00e-19
Uncharacterized protein {ECO:0000313|EMBL:AEI51696.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.5
  • Coverage: 168.0
  • Bit_score: 102
  • Evalue 5.20e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 615
ATGAAGCGTGTAAGCCGGATGATATTATACCTGTTTTTAATTCCTAACCTCCTGATGGGGCAGGGACGGAAACGCCCGGTACCGATCCGCCGTACCGTGTCGCTACAGACCAGTGTAACCGGCGATAGCCTGATCGTTTACGACCCGGCCCGGCCCCTGGTCTTGTCCGATTTTGAAGGTCCTGCCGATGCGGGTTCCGATGGTGTGGCAGCAACTTTCAGCGGGATGCAGATGGCTTTTTACGGCGAAGAAAGAGGCGGCGTACTCCAGGTGGATGTACAGGTGCTGGTCTACTTCAATAAAACAAAGTCATGGACCAAAAAAGACGGGCGCAATAAGGAAGTGCTGGCACATGAGCAGATCCATTTCGATATCACCGCCCTATATGCCTGTGCTTTTATACATGCGGTGAAGGAATACCCTTTTACGCCTTCGGGTGTCAAGCTCGAACTGCGCGCACTCAATAAACAGTTTATGGAACAGATGCAGCAGGCGCAGGACAGCTACGACCGGGAAACCCGCCATGGTACCATCAAAGAACAGCAGGCCGCCTGGGCCGCCAGGATCCGCAAGCAGCTGGAAACACAGGATTGTTACCCGCAGAATGGGAAGTAA
PROTEIN sequence
Length: 205
MKRVSRMILYLFLIPNLLMGQGRKRPVPIRRTVSLQTSVTGDSLIVYDPARPLVLSDFEGPADAGSDGVAATFSGMQMAFYGEERGGVLQVDVQVLVYFNKTKSWTKKDGRNKEVLAHEQIHFDITALYACAFIHAVKEYPFTPSGVKLELRALNKQFMEQMQQAQDSYDRETRHGTIKEQQAAWAARIRKQLETQDCYPQNGK*