ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_147250

Search features with annotation key words

Displaying items 91-120 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_147250_91
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(91784..93454)
DNA (1671bp) protein (557aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BDM6_9MICO
signal transduction histidine kinase
berkeley_reactor_200306_planktonic_scaffold_147250_92
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(93465..94145)
DNA (681bp) protein (227aa)
Response regulator receiver n=2 Tax=Microbacterium RepID=H8E1L7_9MICO
Transcriptional regulator {ECO:0000313|EMBL:KIC58256.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
mtrA; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
berkeley_reactor_200306_planktonic_scaffold_147250_93
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(94311..94955)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036EB102
Porin {ECO:0000313|EMBL:KHK99877.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_94
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(95106..97379)
DNA (2274bp) protein (758aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Catalase-peroxidase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEM2_9MICO
catalase
berkeley_reactor_200306_planktonic_scaffold_147250_95
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(97376..97846)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXG7_9MICO
Fur family transcriptional regulator {ECO:0000313|EMBL:KIC59547.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ferric uptake regulator
berkeley_reactor_200306_planktonic_scaffold_147250_96
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(97982..99463)
DNA (1482bp) protein (494aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Adenosylhomocysteinase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1L4_9MICO
cell division protein MraZ
berkeley_reactor_200306_planktonic_scaffold_147250_97
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(99504..99710)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E1L3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC09033.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_98
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

99815..100246
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YYQ2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC59550.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_99
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(100277..101722)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEM7_9MICO
Large extracellular alpha-helical protein {ECO:0000313|EMBL:KIC59551.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
large extracellular alpha-helical protein
berkeley_reactor_200306_planktonic_scaffold_147250_100
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(101719..104553)
DNA (2835bp) protein (945aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXH0_9MICO
Glycosyl transferase {ECO:0000313|EMBL:EXJ52661.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
glycosyltransferase
berkeley_reactor_200306_planktonic_scaffold_147250_101
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(104620..104937)
DNA (318bp) protein (106aa)
Transcriptional regulator WhiB n=2 Tax=Microbacterium RepID=H8E1K9_9MICO
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
WhiB family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_147250_102
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(105094..106257)
DNA (1164bp) protein (388aa)
Mannose-6-phosphate isomerase, class I n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BDN4_9MICO
Phosphoheptose isomerase {ECO:0000313|EMBL:KIC59553.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
phosphomannose isomerase
berkeley_reactor_200306_planktonic_scaffold_147250_103
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

106300..107703
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AIW1_9MICO
Ligase {ECO:0000313|EMBL:EXJ52658.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
lipid A core - O-antigen ligase
berkeley_reactor_200306_planktonic_scaffold_147250_104
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

107700..109028
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DB0C0E
Uncharacterized protein {ECO:0000313|EMBL:EXJ52657.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
lipid A core - O-antigen ligase
berkeley_reactor_200306_planktonic_scaffold_147250_105
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(109030..109770)
DNA (741bp) protein (247aa)
Polysaccharide/polyol phosphate ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YRE0_9MICO
Sugar ABC transporter {ECO:0000313|EMBL:EXJ52652.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
polysaccharide/polyol phosphate ABC transporter ATPase
berkeley_reactor_200306_planktonic_scaffold_147250_106
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(109770..110564)
DNA (795bp) protein (265aa)
sugar ABC transporter n=1 Tax=Microbacterium yannicii RepID=UPI000302614F
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
polysaccharide/polyol phosphate ABC transporter permease
berkeley_reactor_200306_planktonic_scaffold_147250_107
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

110660..111661
DNA (1002bp) protein (334aa)
Glycosyl transferase family 2 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1K6_9MICO
Glycosyl transferase family 2 {ECO:0000313|EMBL:EIC09026.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
glycosyltransferase
berkeley_reactor_200306_planktonic_scaffold_147250_108
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

111698..113620
DNA (1923bp) protein (641aa)
Glycosyl transferase family 2 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1K5_9MICO
Glycosyl transferase family 2 {ECO:0000313|EMBL:EIC09025.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
glycosyltransferase
berkeley_reactor_200306_planktonic_scaffold_147250_109
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(113660..114796)
DNA (1137bp) protein (379aa)
UDP-galactopyranose mutase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1K4_9MICO
UDP-galactopyranose mutase {ECO:0000313|EMBL:EIC09024.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
glf; UDP-galactopyranose mutase
berkeley_reactor_200306_planktonic_scaffold_147250_110
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(114858..116087)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1K3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC09023.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_111
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(116084..116986)
DNA (903bp) protein (301aa)
Glycosyl transferase family 2 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1K2_9MICO
Glycosyl transferase family 2 {ECO:0000313|EMBL:EIC09022.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
family 2 glycosyl transferase
berkeley_reactor_200306_planktonic_scaffold_147250_112
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(117037..118272)
DNA (1236bp) protein (412aa)
Glycosyltransferase-like protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1K1_9MICO
Glycosyltransferase-like protein {ECO:0000313|EMBL:EIC09021.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Glycosyltransferase-like protein
berkeley_reactor_200306_planktonic_scaffold_147250_113
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

118314..119180
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1K0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC09020.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
glycosyl transferase family 2 protein
berkeley_reactor_200306_planktonic_scaffold_147250_114
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

119173..120060
DNA (888bp) protein (296aa)
Glycosyl transferase family 2 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1J9_9MICO
Glycosyl transferase family 2 {ECO:0000313|EMBL:EIC09019.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
family 2 glycosyl transferase
berkeley_reactor_200306_planktonic_scaffold_147250_115
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

120232..121368
DNA (1137bp) protein (379aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1J8_9MICO
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EIC09018.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
nucleoside-diphosphate-sugar epimerase
berkeley_reactor_200306_planktonic_scaffold_147250_116
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(121361..121825)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1J7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC09017.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_117
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(121822..122595)
DNA (774bp) protein (258aa)
Glycosyl transferase family 2 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1J6_9MICO
Glycosyl transferase family 2 {ECO:0000313|EMBL:EIC09016.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
glycosyl transferase family protein
berkeley_reactor_200306_planktonic_scaffold_147250_118
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(122592..124535)
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1J5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC09015.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_147250_119
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

124680..125549
DNA (870bp) protein (290aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1J4_9MICO
dTDP-glucose pyrophosphorylase
berkeley_reactor_200306_planktonic_scaffold_147250_120
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

125549..126550
DNA (1002bp) protein (334aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXI5_9MICO
rfbB; dTDP-D-glucose 4,6-dehydratase
Displaying items 91-120 of 252 in total

View Taxonomy