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berkeley_reactor_200306_planktonic_scaffold_33119_28

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 28959..29573

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003669ACC similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 191.0
  • Bit_score: 143
  • Evalue 1.90e-31
Putative TetR-family transcriptional regulator {ECO:0000313|EMBL:CDJ99492.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 203.0
  • Bit_score: 148
  • Evalue 6.30e-33
transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 211.0
  • Bit_score: 137
  • Evalue 2.90e-30

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Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGCACTCTGTGACCGAGAGTGCAAACGGATCCCGCGGGAGACGCATCGCCGAGACAGCGGCCGCGCTGCGCACCGCCGCACGACGGCTGACCGCCGCGCACGGACTCAACGGGTTCACGATCGACCAGCTGTGCGCCGACGTCGGGGTCTCACGCCGGACGTTCTTCAACTACTTCGCATCGAAGGAGAACGCCGTGCTCGGGCTCACGCTGCGCGCGCATCTCGAGGAGCTCGACGAGCGGTTCGTGCACGGCGACGGCGACCTGCTCGACGAGTACCTGCACCTGCACGCCGCCCGCTGGGCACTGATGGGCCACACCCGGACGGAGGCCGAGGAGGTCGGGCGCCTGCTCGCGGACGAGCCGCGCCTGCACGCCCAGCTGATGTCGATCATGGCGGATGCCGAGGTCAACGACATCGCGCTGGTGCGCAGCCGCCCCGACGCGCCGACCGACCCGCTCGTCGTCGACATGCTCGTGCGGATGATCAATCCGCTCCTGCGGTCCGCGATCGCGGCGTTCTTCGACGAGGAGCACCCCGACTTCCTCACCCTCCTGCGCCGCCGCGCCGACGCGGGCCGCGCCGCCCTCTCCCCGACCTCGCCGAAGGAATGA
PROTEIN sequence
Length: 205
MHSVTESANGSRGRRIAETAAALRTAARRLTAAHGLNGFTIDQLCADVGVSRRTFFNYFASKENAVLGLTLRAHLEELDERFVHGDGDLLDEYLHLHAARWALMGHTRTEAEEVGRLLADEPRLHAQLMSIMADAEVNDIALVRSRPDAPTDPLVVDMLVRMINPLLRSAIAAFFDEEHPDFLTLLRRRADAGRAALSPTSPKE*