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berkeley_reactor_200306_planktonic_scaffold_33119_42

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 47215..48096

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0X5_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 291.0
  • Bit_score: 494
  • Evalue 4.80e-137
LysR substrate-binding protein {ECO:0000313|EMBL:EIC09376.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 291.0
  • Bit_score: 494
  • Evalue 6.70e-137
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 295.0
  • Bit_score: 372
  • Evalue 1.00e-100

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGTTCGAGCTGCGGCGCCTGCGCCTGCTCCACGAGCTGGCGCAGCGGGGGACCATCGCCGCCGTCGCACAGGCCCTCTCGTACAGCCCGTCCACCATCTCGCAGCAGCTCGCGCAGCTGGAACGCGACGCGGGCGTGGCTCTTCTCACCCCCGACGGTCGCCGCGTCCGTCTCACCGCGCACGGCGAGACGCTCGCCGCCTTCGCGGCGCGCGCCCTCGCCGCGGACGAGGAGATCCGCGGCGAGCTCGAGGAGCTGCAGGCCGGCGTCGCCCCCGTGCGGGTCGCGGTGCTGCAGACGGCGGCGCGCACGATCGTCCCCTCCGCCCTGACCCTGCTCGCGGCGCGGGCTCCCGGGCTGCGTGTCGAGCTCGCCGAGCTGCCGCCCGAGGAGGGCCTCTTCGAGCTCGGCGCCCGGGGGTTCGACCTGGCGATCGCCGAGCAGTACCCCGGGCTGACCCGGCCGCACCGTTCCGAGCTCGACCGCGACGTACTCGGCTCCGACCCGATCCGGCTCGCGACCTCGGGCGAGCCGCGCCCGCTCGCCGCGCTGGGCGACCGCCCGTGGGTGATGGAGCCCCGCGGCACCGCGGCGCGGGAGTGGGCCCTGCAGCAGTGCCGCGCTGCGGGTTTCGAGCCCGACGTGCGCTTCGAGCTCGCCGATCTCGGCGGGCACGTCGAGCTCATCGCGGCCGGTCACGCCGTCGGGCTGCTGCCCGACCTGCTGTGGGGCGGCGGCGTGCCCCGGGTGCGGTTGACTCCCCTGCCGGGCGACCCCGTCCGCGAGATCTTCACGGCGGCGCGCCGCGCCAGCCGCAACCGGCCCGGCATCCGGGCCGTGCGCGACGCGCTCAGCGACGCGTTCGCCGCACGCTCACGCTGA
PROTEIN sequence
Length: 294
MFELRRLRLLHELAQRGTIAAVAQALSYSPSTISQQLAQLERDAGVALLTPDGRRVRLTAHGETLAAFAARALAADEEIRGELEELQAGVAPVRVAVLQTAARTIVPSALTLLAARAPGLRVELAELPPEEGLFELGARGFDLAIAEQYPGLTRPHRSELDRDVLGSDPIRLATSGEPRPLAALGDRPWVMEPRGTAAREWALQQCRAAGFEPDVRFELADLGGHVELIAAGHAVGLLPDLLWGGGVPRVRLTPLPGDPVREIFTAARRASRNRPGIRAVRDALSDAFAARSR*