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berkeley_reactor_200306_planktonic_scaffold_340111_4

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 3413..3937

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 166.0
  • Bit_score: 240
  • Evalue 1.40e-60
Shikimate kinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFK3_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 166.0
  • Bit_score: 240
  • Evalue 9.70e-61
shikimate kinase similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 166.0
  • Bit_score: 240
  • Evalue 2.70e-61

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGACGGGGCGCGCACTCGTCCTGATCGGGCCGATGGGAGCCGGCAAGACGAGCGTCGGCCGCCGCGTCGCGAGGGCCCTGGATCGACCGTTCACCGACACCGACAAGATCGTCGTCCGCGATCACGGGGCGATCGCCGACCTGTTCACCACGCACGGCGAGGCGCACTTCCGCTCCGTCGAGCGCCTCGCGGTGCAGGAGGCCCTCGCCGTCGGCGGGGTGGTCGCCCTCGGCGGCGGGTCGGTCCTCGACCCCGCCACCCGCGATGACCTCCGACGGCACGACGTCGTGCTGCTGACCGTCCAACCGCACATCATCGCCTCGCGCATCGGGGGCGGTGCGCGCCCGCTCCTGGCCGGCGAAGACCCCGTGGCGCGCTGGACCCGCATCTTCGATGAACGGCGCCCCGTGTACGAGCAGGTCGCCGACATCACCTTCGACACCTCGACCGGACCCCTCGCCGATGTCGTGGCCGGCATCGTCGACTGGGTGCACGCAGACGCCCGGCGTCAGGAGGACTCATGA
PROTEIN sequence
Length: 175
MTGRALVLIGPMGAGKTSVGRRVARALDRPFTDTDKIVVRDHGAIADLFTTHGEAHFRSVERLAVQEALAVGGVVALGGGSVLDPATRDDLRRHDVVLLTVQPHIIASRIGGGARPLLAGEDPVARWTRIFDERRPVYEQVADITFDTSTGPLADVVAGIVDWVHADARRQEDS*