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berkeley_reactor_200306_planktonic_scaffold_340111_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(6980..7876)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 292.0
  • Bit_score: 398
  • Evalue 6.70e-108
shikimate dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A6100 similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 298.0
  • Bit_score: 400
  • Evalue 9.60e-109
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 284.0
  • Bit_score: 396
  • Evalue 3.90e-108

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 897
GTGATCGTCACCCACACCGCTCGGCGTCCCTATCTCGTGGGACTCGTCGGCAGCGGGGTCACGCCCTCGCTCACGCCGCCGATGCACATGGCGGCCGCACGCGAGCTTGGTCTCGAGTACGTCTACCGCCCTCTCGACATCACGGCGCTCGGCCTGTCCCCCACCGCAATCGGCGACATCCTCACGTGGGCGGAGCGCCTCGGCTACGACGCCCTCAACATCACGCATCCGTGCAAGCGGCTCGTCCTGGACCACCTCGACCACCTCGACCCGCTGGCCGCGGCGCTCGGCGCCGTCAACACCGTGCTGTTCACGCCGGAGGGCCGTATCGGCCACAACACCGACACGACCGGCTTCGCCGCCGGGTTCGTGTCCGGCCTCCCCGGCGTCGCGACCGACCGCGTCGTGCAGCTCGGTGCCGGAGGTGCGGGGTCGGCGGTCGCCGATGCGCTCCTGCGCGGTGGCGTCGGTCGACTGATCGTGGTCGACATCGACGGCCGTCGCGCGGCGGAACTGGTCGACGATCTGCGGTCGCGCCACGGAGTCGAGCGCGTCGCCGTCGGTGCCGCCGACGAGCTGGCCGTCCTGCTGGCCGCGGCGGACGGACTGGTCCACTGCACGCCCACGGGGATGGCCGAACACCCCGGGATGCCCGTCGACGCGGTGCTCCTGCGGCCGACCCTCTGGGTCGCCGACATCGTCTACCGCCCCTATGAGACGGCGCTGCTGCGGGCCGCGCGCGCTCTCGGGGCTCCGACGCTCGACGGCGGACGGATGGCCGTGTTCCAGGCCGTCGACGCCTTCGAGCTGATCACCGGCATCCGGCCCGACGCCGATCGGATGTCCGCCCACTTCCACGCTCTCGTGGCCGCCGACCACGACGTGCTCACCCGCTGA
PROTEIN sequence
Length: 299
VIVTHTARRPYLVGLVGSGVTPSLTPPMHMAAARELGLEYVYRPLDITALGLSPTAIGDILTWAERLGYDALNITHPCKRLVLDHLDHLDPLAAALGAVNTVLFTPEGRIGHNTDTTGFAAGFVSGLPGVATDRVVQLGAGGAGSAVADALLRGGVGRLIVVDIDGRRAAELVDDLRSRHGVERVAVGAADELAVLLAAADGLVHCTPTGMAEHPGMPVDAVLLRPTLWVADIVYRPYETALLRAARALGAPTLDGGRMAVFQAVDAFELITGIRPDADRMSAHFHALVAADHDVLTR*