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berkeley_reactor_200306_planktonic_scaffold_340111_26

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 25721..25975

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 84.0
  • Bit_score: 169
  • Evalue 1.90e-39
DNA-directed RNA polymerase subunit omega n=2 Tax=Microbacterium RepID=H8E9X0_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 84.0
  • Bit_score: 169
  • Evalue 1.30e-39
rpoZ; DNA-directed RNA polymerase, subunit K/omega similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 84.0
  • Bit_score: 164
  • Evalue 9.20e-39

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Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGGCCGGACGTGACAAGGGCATCATCGACCCGCCCATCGACGCACTGCTCGACAAGGTCGACTCCAAGTACCAGCTCGTGATCTACGCGGCCAAGCGCGCGCGCCAGATCAACGACTACTACTCCGACCTGCACGAGGGGAACCTCTTCGACAACGTCGGTCCGCTCGTCGACTCGAGCGTCGAGGACAAGCCCCTCACGATCGCGCTGCACGAGATCCACGAGGACAAGCTGCGCCTGCGCGCGGCCGAGTGA
PROTEIN sequence
Length: 85
MAGRDKGIIDPPIDALLDKVDSKYQLVIYAAKRARQINDYYSDLHEGNLFDNVGPLVDSSVEDKPLTIALHEIHEDKLRLRAAE*