ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_9433_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(4438..5256)

Top 3 Functional Annotations

Value Algorithm Source
acyl-CoA oxidase id=99129 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1 similarity UNIREF
DB: UNIREF100
  • Identity: 26.5
  • Coverage: 185.0
  • Bit_score: 82
  • Evalue 6.90e-13
FkbM family methyltransferase similarity KEGG
DB: KEGG
  • Identity: 30.4
  • Coverage: 171.0
  • Bit_score: 68
  • Evalue 2.90e-09
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 239.0
  • Bit_score: 161
  • Evalue 1.60e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 819
ATGAATTCCAGCTTGAGCCAGCGGGTGGCCGGCAAGTGGCACGCGGTCCGCGTGCTGTACGAGTTCCGCCGCGGCCTGGAAAACTGGCGCGAGGTCTGGAACGCCTATCGTTGCGGCGCCCCGATCCCGCCGCTAAAGCTGCGCGGCGGGCTGACCCTGGAACACGGGTCGGAAGACGACGCGATCCGCTTGTTCCAGGAGATCTTCGTCGGCCGGTGCTACACCCGGGGCGGGTTCTACCAGCCCCGCGCGGGCGAGACCGTGCTCGACCTCGGGGCCAACATCGGCGCCTTCGCCCTGGCGATGCAGTGGCTCGGCCGCGGCGTCCGCGTCCACAGTTTCGAGCCCGCCTCTGACACCCGGGCGCGCCTGGAGCGAAACGTCACCGTGAACGGCCTCGAAGGGCTCGTGACTGTCCACCCTTATGCGGTGACGGGGTCCGCCGGAACGCTGACCCTCAAGCGCGGCGGCGTCGCCGGGCACAGTTCTCTCTTCGCGAGCCGGTTCGTCGACGGAGGCTACGAGGAGCAGGTCCAGGCGGTCGGCCTTGACGACGCCGTCGCCCTGACCGGCTCGCCGACGATCGACCTGCTGAAGATCGACATCGAAGGGGCCGAGATCGAGGTGGTCGAGGGGGCCGGCGCGGACACCTGGGCGCGGGTGCGCCGGGTGGTCGTCGAGTACCACGACCTGTTCCGCCCCGGCTGCCGCGAGCGGGTCGCCCGGGTGCTCCAGGCCCAAGGGTTCGCCCGCGTCGAGACCCTGCCCGAGCCGTCCACGCCCGAGCTGGGCCTCGTCCGCGCCTGCCGCCCGGACTGA
PROTEIN sequence
Length: 273
MNSSLSQRVAGKWHAVRVLYEFRRGLENWREVWNAYRCGAPIPPLKLRGGLTLEHGSEDDAIRLFQEIFVGRCYTRGGFYQPRAGETVLDLGANIGAFALAMQWLGRGVRVHSFEPASDTRARLERNVTVNGLEGLVTVHPYAVTGSAGTLTLKRGGVAGHSSLFASRFVDGGYEEQVQAVGLDDAVALTGSPTIDLLKIDIEGAEIEVVEGAGADTWARVRRVVVEYHDLFRPGCRERVARVLQAQGFARVETLPEPSTPELGLVRACRPD*