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berkeley_reactor_200306_biofilm_scaffold_3161_7

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(7287..8627)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 447.0
  • Bit_score: 580
  • Evalue 1.40e-162
tRNA modification GTPase MnmE n=2 Tax=Singulisphaera acidiphila RepID=L0D969_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 447.0
  • Bit_score: 580
  • Evalue 1.00e-162
small GTP-binding protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 447.0
  • Bit_score: 580
  • Evalue 2.90e-163

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1341
ATGATTCTCGACACGGCCGACACGATCGCGGCGGTCGCGAGCCCGCCGGGGTTCGGGTTCCGGGGGATCGTCCGCTTAAGCGGCCCCGGAGCCTGGGACGTCGCCCTGACCGGATTCACCCCCGACCGGGGGGCGGAGCTTCCCGCCCGTGGAGGCCGGCACACCGGGGCGTACCGGCTCGACGGTTTGAGGCCGGTTTTGCCCGCGTCGGTGGTCCTTTGGCCGGGCCCGCGGACGTACACGGGGCAGCCGTCGGCCGAGGTCCACACGGTCGGCTCGCCGCCGCTCTTGCAACTCCTGCTCGCGCATGCGCTGACGCACGGGGCGCGCCTGGCCGAGCCGGGGGAATTTACCCTCCGGGCCTTCCTCTCGGGCCGGATCGACCTGACCCGCGCTGAAGCGGTGCTCGGCGTGATCGAGGCCCGCAGCCCCGCACAACTTCAGGCCGCGCTCGGTCAACTCGCCGGCGGCCTGGCGGGCCCGGTCGCCGCGCTCCGCGATAGGCTCCTCGACGTACTGGCCCACCTTGAAGCGAACCTCGACTTCGTCGACGAGCCCGACGTTGACGAACTCGGGCGTGCCGAACTGGCCCGTGAACTGGCCCAGGGTTCGGCCGACCTTGTCGCCCTGGCCGACCACCTCCGCGGCCGCGACCGCCCCGGCGGGCACCCCCGGGTCGTCCTCGCCGGGCCCCCGAACGCCGGCAAGAGCCGGCTGTTCAACGCCCTGGTCGGCCGTGCCCAGGCCCTCGTCTCCCCTCGGCCTGGTACGACGCGCGACTACCTCGCCGCCCTGGTCGATTGCGACGGCCTGACCGTCGAACTCGTCGACACCGCCGGCGAAGAGTCCGCCTCGACCACGATCGAGGCCCGCGCCCAGGCCCACCGCGCCGAGCAGGTCGGTCGGGCCGACCTGTTGCTCGACTGTCGGCCGGCGGACGGAGAGCCCGCCGACCCCCCCCCGCCCGCCCGCCCGAGCCTCTCGGTGCGCACCAAGTCGGACCTCCGCCCCGAAGCCCCGCCCGAGCTCGGCGTCTACCCCACGAGCGCCGCGACGGGCGCCGGCCTCGAACCGCTCCGCCTTGCCATCGCCTCGGCGCTCCGCGCCCGGTCTGATGAGACCGATCTTCCCACGACCACCGGCGCCCGCTGCCGCGAGAGCCTGGTCCTCGCGAGCGACGCCCTCGCCTCGGCGTCCTCAATCCTCGCCCTCGGCGGCGGCGAGGAACTCGTCGCGGTCGACCTCCGTCAGGCCGTCGATGAACTGGGCAAGGTCGTCGGCGCGGTCGTCACCGACGACATCCTCGACCGGATCTTTCGGCGCTTCTGTATCGGCAAGTGA
PROTEIN sequence
Length: 447
MILDTADTIAAVASPPGFGFRGIVRLSGPGAWDVALTGFTPDRGAELPARGGRHTGAYRLDGLRPVLPASVVLWPGPRTYTGQPSAEVHTVGSPPLLQLLLAHALTHGARLAEPGEFTLRAFLSGRIDLTRAEAVLGVIEARSPAQLQAALGQLAGGLAGPVAALRDRLLDVLAHLEANLDFVDEPDVDELGRAELARELAQGSADLVALADHLRGRDRPGGHPRVVLAGPPNAGKSRLFNALVGRAQALVSPRPGTTRDYLAALVDCDGLTVELVDTAGEESASTTIEARAQAHRAEQVGRADLLLDCRPADGEPADPPPPARPSLSVRTKSDLRPEAPPELGVYPTSAATGAGLEPLRLAIASALRARSDETDLPTTTGARCRESLVLASDALASASSILALGGGEELVAVDLRQAVDELGKVVGAVVTDDILDRIFRRFCIGK*