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berkeley_reactor_200306_biofilm_scaffold_16593_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 3383..3712

Top 3 Functional Annotations

Value Algorithm Source
DNA damage-inducible protein D n=1 Tax=Escherichia coli RepID=UPI000378C9CC similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 100.0
  • Bit_score: 124
  • Evalue 4.90e-26
DNA-damage-inducible protein D {ECO:0000313|EMBL:EOW14580.1}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 100.0
  • Bit_score: 121
  • Evalue 4.50e-25
dinD; DNA-damage-inducible protein similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 100.0
  • Bit_score: 120
  • Evalue 1.50e-25

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGAGGGATCTGAGACGATTCAGGCCGGGCTACTCTCCCTTCGACGAGATCATGCACGAGGAGGACGACGGTACGCAATGGTGGAGCGCTCGAGAGATGATGCCGTTTCTCAACTACTCCGATTGGAGGAATTTAGAGAACGTGCTCAGAAAGGCAAAATCGGCCTGTAGAAACTCTGGCCAACAGCCTTCAGACCATTTCGTTGACGTCACCAAAATGGTCGAGATTGGGTCTGGAGGGAAAAGGACCGCAACCGACGTACACTTGACCCGGTTCGGATGCTACCTGGTCGCCATGAACGGCGACCCCGACAAGTTTGAGGTGGCCGCA
PROTEIN sequence
Length: 110
MRDLRRFRPGYSPFDEIMHEEDDGTQWWSAREMMPFLNYSDWRNLENVLRKAKSACRNSGQQPSDHFVDVTKMVEIGSGGKRTATDVHLTRFGCYLVAMNGDPDKFEVAA