ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_16467_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(22122..22616)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0L3B8_AGRSH similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 161.0
  • Bit_score: 142
  • Evalue 3.40e-31
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 161.0
  • Bit_score: 142
  • Evalue 9.60e-32
Uncharacterized protein {ECO:0000313|EMBL:EHJ96966.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 161.0
  • Bit_score: 142
  • Evalue 4.80e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGAACGACCTCTTCACCAACCCCTTCCACGCCACCCGCGACGCCGAACGGGCGGGCCTCTGGGAGATGCTCGTCGCACGGGACAACGACGCGTTCGCCGCGGCCGACTGGGGCCCGGTGGCGGACGACTTCGCAAGCGACCGCTTCGAAGGGATCTCGGCGAACGGCTCGGCCGACCCCGCGTCCTGGACGCTCGCGTACCCGACCGTCGACGCCTATCGGGTGGATTGGCTGAGGATGGCCGACGAATTCCTCCTGAAGCCGCTGGTCGAGGGCGACCACCGGGCGCTGCTCTACCTGATGACCACGCTCGCGCGGATCGACATCGTCGGCGATCGGGCGGCCGTTTGGAAACAGTTCCGTGCGAACGCACGTCTTCGCGACGGCGGCGTTTTGCGGATCGCGGCGCAATCCCTCTTCCGGCTCCACCGGATCGACGGCCGCTGGATGATCGTCGGGTTCGTCGGCTACCTCCCCCTGGAGGTCGCGCAATGA
PROTEIN sequence
Length: 165
MNDLFTNPFHATRDAERAGLWEMLVARDNDAFAAADWGPVADDFASDRFEGISANGSADPASWTLAYPTVDAYRVDWLRMADEFLLKPLVEGDHRALLYLMTTLARIDIVGDRAAVWKQFRANARLRDGGVLRIAAQSLFRLHRIDGRWMIVGFVGYLPLEVAQ*