ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_21675_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(21928..23124)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DA32_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 375.0
  • Bit_score: 518
  • Evalue 5.50e-144
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 375.0
  • Bit_score: 518
  • Evalue 1.60e-144
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase {ECO:0000313|EMBL:AGA25693.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 375.0
  • Bit_score: 518
  • Evalue 7.70e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1197
ATGACGCGCGACGAGGCGTTACTGGCCGGGGTCGGTCTGGGACTGACGGCGTTGGCCTTCGTCCTCAGCGCCGCACTCTGCGCACTGGTCCGTGTCCTGGCACCACGGCTCGGATTTCTCGACCGCCCCGGCGGACACAAAGGGCACAAGGCCCCCACGCCGCTCGGTGGCGGCGTGGCTATCTGGCTGACGACCGTCTCGATCCCCCTGCTCGGAATGCTCGCGGCCGAAATCGGCCGGTCGTGGCTCCCTCCCGAGATCGCCCGGTACGCCGCGGGGGTCCGGTCTCAAAGCGGGGAACTTCTCCTGATCCTCGGCCTCGCCACGCTCATCATGCTGATGGGCCTGGTCGACGACCGCCGGGCGCTCGGGTGGAAGCCTCGGTTGGGGATCCAGATCGGCCTGGCGGTCATCCTGGCCGTGTGCGGGGTGCGGATCACGCTGTTCGGGCCGTTCGCCAACCCGGCCTTCGGCGGCGCAGTGACGGTCCTCTGGGTCGTCGGCCTGACCAACGCCTTCAACTTCCTCGACAACATGGACGGCCTCGCGGCCGGCGTGGGGCTGATCGCGGCCTTGTTGTTCACCGGGGCGCAGGTCGCGGCCGGGAGCCTGTTCGTGCCGGCGGTGCTGCTCGGCCTGGTCGGCGCGCTGGCCGGGTTTCTCGTCCACAACCGCCACCCCGCGCGGCTGTTCATGGGCGACGCCGGGAGCAACTTCCTCGGCTTCCTCCTCGGGGCGACGACCGTGGCCGGGACGTATTACCGCTACGGCCCCGGCCAGTCGAAGCTCGGGGTGCTCGCGCCGCTGCTCGTGATGGCGGTGCCGCTGTACGATTCCACGTCCGTCATTCTGATCCGGCTGCGCGAGGGGCGGAGCCCGTTTCAGGGAGACCGGCGGCACTTTTCGCACCGGCTGGTCGAGCGCGGCTTGACGCCGCCGCAAGCGGTACGCACGATTAACTTAGTGACCCTCGCCGGGGGCCTCGGTGCGCTGCTGCTGCACCGGCTCGACCCGGCCGGGGCGGTTGTGGTCGCGGCCCAGACGGTCTGCCTGCTCGGGGTGGTGGCGATCCTGGAAGTCTCCGCGACCCGACCGGAGCGAGAGCGAGGACCCGTCCATGGCGAGGCGACACCCACGGACCCCCAACCCGACAGCGCCGGCACACGACCCGGCGGCGAAACCGCGGCGCGACGTTAA
PROTEIN sequence
Length: 399
MTRDEALLAGVGLGLTALAFVLSAALCALVRVLAPRLGFLDRPGGHKGHKAPTPLGGGVAIWLTTVSIPLLGMLAAEIGRSWLPPEIARYAAGVRSQSGELLLILGLATLIMLMGLVDDRRALGWKPRLGIQIGLAVILAVCGVRITLFGPFANPAFGGAVTVLWVVGLTNAFNFLDNMDGLAAGVGLIAALLFTGAQVAAGSLFVPAVLLGLVGALAGFLVHNRHPARLFMGDAGSNFLGFLLGATTVAGTYYRYGPGQSKLGVLAPLLVMAVPLYDSTSVILIRLREGRSPFQGDRRHFSHRLVERGLTPPQAVRTINLVTLAGGLGALLLHRLDPAGAVVVAAQTVCLLGVVAILEVSATRPERERGPVHGEATPTDPQPDSAGTRPGGETAARR*