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berkeley_reactor_200306_biofilm_scaffold_21180_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(17419..17868)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DFB similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 149.0
  • Bit_score: 235
  • Evalue 3.50e-59
response regulator receiver protein similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 149.0
  • Bit_score: 232
  • Evalue 6.40e-59
Response regulator receiver protein {ECO:0000313|EMBL:AET89342.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 149.0
  • Bit_score: 232
  • Evalue 3.20e-58

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Taxonomy

Burkholderia sp. YI23 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGCTGAAACCGATCCTCCTCGTCGAGGATAACCCGAAGGACCTCGAGCTTTCGCTCGTGGCCCTGGAGAAGAGCCAACTGGCCAACGAGGTCATCGTCACCCGCGACGGGGCCGAGGCGCTGGATTACCTGCGCTGCGAGGGCGCGTTCGCCTCCCGCCCCAAAGGGAACCCCGCCGTCGTCTTGCTCGACTTGAAGCTTCCCAAAATCGATGGGCTGGAGGTGCTGGAGCTCATCAAACGCGACCCCGAACTGCGGAGCATCCCGGTCGTCATGCTCACTTCCTCGCGCGAGGAACAGGACCTGCTCAGGAGCTACAAGGCCGGGGTCAACGCCTACGTGGTCAAGCCCGTGGGGTTCAAGGAGTTCATCGAGGCGATCCAGGACCTCGGCGTGTTCTGGGCCTTGGTCAACGAACCCCCCCCCGGCAGTCTCCGCCCGAAGCGGTGA
PROTEIN sequence
Length: 150
MLKPILLVEDNPKDLELSLVALEKSQLANEVIVTRDGAEALDYLRCEGAFASRPKGNPAVVLLDLKLPKIDGLEVLELIKRDPELRSIPVVMLTSSREEQDLLRSYKAGVNAYVVKPVGFKEFIEAIQDLGVFWALVNEPPPGSLRPKR*