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berkeley_reactor_200306_biofilm_scaffold_19397_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 1104..1697

Top 3 Functional Annotations

Value Algorithm Source
formate dehydrogenase-O, major subunit (EC:1.2.1.2) similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 195.0
  • Bit_score: 213
  • Evalue 3.10e-53
Formate dehydrogenase-O, major subunit n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L5C9_THERP similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 195.0
  • Bit_score: 213
  • Evalue 1.10e-52
Formate dehydrogenase {ECO:0000313|EMBL:KIJ79897.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 194.0
  • Bit_score: 235
  • Evalue 5.00e-59

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Taxonomy

Scytonema tolypothrichoides → Scytonema → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGACACCCGGCGCGACGAACCGGCGTCAGTTCTTCCGCACCACCGGCCTGGCGGGCGGGACGCTCGCGGGGCTCGGGCTCGACCTGAAGCCGGCCGCGGCCGCGGCGGCCAAGGTGAAGCTGAAGGGCGCGCGCGAGGTTCCGAGCGTCTGCCCGTATTGCGCGGTCGGCTGCGCGCAGATCGTCAGCGTCCGCGACCGGCAGATCATCAACATCGAGGGGAACCCCGACAGCCCGATCAGCGGCGGGACGCTCTGCCCCAAGGGGTCGGCCGCCTTCCAACTCGCCGTTAACCCGAACCGGCTGACGAAGGTCAAATACCGCGCCCCGTACGCGAAGGAGTGGGAAGAGAAACCCCTCGCTTGGGCGATGGACCGCATCGCCGCGCGGGTCAAGGAGACGCGCGACGCCACGTTCACGCCCACGTACACCGTTAAGGACCGGGACGGGAAGACGGTCTCGAAGACGGTCAACCACTGTTCCACGATCGCGTCGCTCGGCGGGGCGACGATGGACAACGAGTGGAACTACGCCCACCTGAAACTCTGGCGCGCCCTCGGGCTCATCTGGTTAGAAAACCAGGCGCGAATCTGA
PROTEIN sequence
Length: 198
MTPGATNRRQFFRTTGLAGGTLAGLGLDLKPAAAAAAKVKLKGAREVPSVCPYCAVGCAQIVSVRDRQIINIEGNPDSPISGGTLCPKGSAAFQLAVNPNRLTKVKYRAPYAKEWEEKPLAWAMDRIAARVKETRDATFTPTYTVKDRDGKTVSKTVNHCSTIASLGGATMDNEWNYAHLKLWRALGLIWLENQARI*