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berkeley_reactor_200306_biofilm_scaffold_22420_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(2688..3356)

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 222.0
  • Bit_score: 308
  • Evalue 6.80e-81
Endonuclease III n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DF24_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 222.0
  • Bit_score: 308
  • Evalue 4.80e-81
endonuclease III similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 222.0
  • Bit_score: 308
  • Evalue 1.40e-81

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 669
ATGCCACAGACCAGCCGGCCGAGCTTTGATCCCAAATCCCAGGCCAAGCGTGTGGTCGGGGGGCTTGAAAAACTCTACCCCGACTCGCACTGCGCCCTGATCCACGAGAATCCCTACCAACTCCTCGTCGCCACGATCCTCTCGGCCCAGTGTACCGACGCGCGGGTCAACCAGGTGACCCCCGCCCTGTTCGCACGCTATCCCGACCCGGCCAGCCTGGCCCGCGCAGAACTCGACGAGTTGGAGACCCTGATCCACTCGACCGGCTTCTTCCGGGCGAAGGCAAAGAACCTTAAAGGAATGGCCGTGAAGGTCGTCGAAGACCACAGCGGCGAGATCCCCGCCGACCTCGACGCCTTGACGGCGCTCCCCGGGGTCGGCCGCAAAACGGCGAACGTGGTGCTCGGCAACGCGTTCGACATCGCCTCGGGCGTCGTCGTCGACACCCACGTCAAACGCCTCGCCCACCGGCTCGGCCTGACCGAAAGCCGCCTGCCGGAAGCCGTCGAACGCGACCTGATCCGCCTCGTCCCCAAGTCGCACTGGGTCCTCTTGAGCCACCGCCTGATCGAGCACGGGAGGAAGGTTTGCATCGCCCGCAAGCCGCGCTGCTCGGCCTGTGACCTCGCCACGCTTTGCCCCAAGCGTGGCGTCACGTCATCGGCCTGA
PROTEIN sequence
Length: 223
MPQTSRPSFDPKSQAKRVVGGLEKLYPDSHCALIHENPYQLLVATILSAQCTDARVNQVTPALFARYPDPASLARAELDELETLIHSTGFFRAKAKNLKGMAVKVVEDHSGEIPADLDALTALPGVGRKTANVVLGNAFDIASGVVVDTHVKRLAHRLGLTESRLPEAVERDLIRLVPKSHWVLLSHRLIEHGRKVCIARKPRCSACDLATLCPKRGVTSSA*