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berkeley_reactor_200306_biofilm_scaffold_26589_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 6753..8156

Top 3 Functional Annotations

Value Algorithm Source
Pdz domain (Also known as dhr or glgf) protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZUQ9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 33.7
  • Coverage: 448.0
  • Bit_score: 282
  • Evalue 4.60e-73
pdz domain (also known as dhr or glgf) protein similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 453.0
  • Bit_score: 287
  • Evalue 6.90e-75
Pdz domain (Also known as dhr or glgf) protein {ECO:0000313|EMBL:AIE83649.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.5
  • Coverage: 453.0
  • Bit_score: 287
  • Evalue 3.40e-74

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Taxonomy

Fimbriimonas ginsengisoli → Fimbriimonas → Fimbriimonadales → Fimbriimonadia → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1404
ATGATTCTTCGACGTATCGAACCGTACCGCCTGCTCCTCGTTACGCTGGCGGTCTCCATGCCCACGCTTTGCGCCTCAGGGGACGAGCCCGGCGCCAATGACCCGCTGAAGCGCGCCGGCTTCTTCGGCGCCCAGGTCGGCCCCCTGACCGACGAGGCCCGCCGGGAACAAAAGCTGGAGGCGGGGGTCGGAACCCTCGTCATGAAGATCATCCCCGGCTCGACGGCCGAAGAGGCCGGATTCCAGGCCGGCGACGTGATCACGGCCGTCGACGATTCCAAGACCCCCGGGCCTCCTCAATTCGTTGCGGCCCTGTCAGGCCGTAAGGGGGGCGACAAGGCCCGGTTCACCTTCGTCCGCGGGGGCCAATCGAACACCAAGGCGGTGACGATCAAGCCCCGCCCGCGCGAGACGGGCAACGCCGATTTCGACGTGATCTACGACTCGGTCCCGAGTCGAGGCGGCCGGCTTCGGACGATCGTGACCCGACCGAAGGCGTCGGGCAAGCACCCGGTCTTCTTCCTGATCCAGGGGCTCGGCGGCTTCTCGGTCGAGAACATCCCCGGCAACCCCACCTTTTACCCCCCGATCTACGAAGATTTCGCCCGGCGCGGCTACGTCACCCTGCGCGTCGACAAACCCGGCCAGGGGGACAGCGAAGGGGGGCCGACCCGCGACGTCGACTTCGAAACCGAACTCGACGGTTACCGCCAGGCCCTCAAGGCGGTCGTCTCCTACGATTTCGTCGATAAGGACCGGGTCTTTGTCTTCGGCCACAGCATGGGGGGCGTCATGGCGCCGCTGCTCGCCGCCGAACGGCCTGTGAAGGGGATCGCCGCCTACGGGACGGCATCGAAAACCTGGTACGAATACATGCTCGAAAATACGCGCAGGCAAATGACCCTGGAAGGAATCCCGGCCTCCGAGATCGACGACGCCCTGCGTAAGGACGCGGCCATCAACAACGCGCTGTACGCCGAAGGCCGGTCCCCCGAAGAGGTCGTCAAAGCCCACCCCGAACTCGGCCCGAGGATCGACCAACTCATCGCGGACGGCAAGTACTTCGCCGGCCGGCATTACAAGTTCTTCCAACAGCTCGCCGGGAAGAACCTGGCCGCCGCCTGGGAGAAATTCGACGGCCACGCCCTCGCGCTCTGGGGCAAGGCCGACTTCGTCTCGACCGAAGCCGACCACGCCTTGATCGCCGAGATCGTCAACAAGACCCACCCCGGACACGGCACCTTTATGGCCATGGACGGGATCGACCACGGGTTCGGCCGGGCTGTGTCCCAGGACGAGAGCCGAAAGAGCTTCGGTCAGGCGGGGCGATTCAACACGGATATCGTCACGACCCTCCGCGATTGGGTCGCGAAGGTGGATGGTCAGGCCACTCGGGCCCAGTAA
PROTEIN sequence
Length: 468
MILRRIEPYRLLLVTLAVSMPTLCASGDEPGANDPLKRAGFFGAQVGPLTDEARREQKLEAGVGTLVMKIIPGSTAEEAGFQAGDVITAVDDSKTPGPPQFVAALSGRKGGDKARFTFVRGGQSNTKAVTIKPRPRETGNADFDVIYDSVPSRGGRLRTIVTRPKASGKHPVFFLIQGLGGFSVENIPGNPTFYPPIYEDFARRGYVTLRVDKPGQGDSEGGPTRDVDFETELDGYRQALKAVVSYDFVDKDRVFVFGHSMGGVMAPLLAAERPVKGIAAYGTASKTWYEYMLENTRRQMTLEGIPASEIDDALRKDAAINNALYAEGRSPEEVVKAHPELGPRIDQLIADGKYFAGRHYKFFQQLAGKNLAAAWEKFDGHALALWGKADFVSTEADHALIAEIVNKTHPGHGTFMAMDGIDHGFGRAVSQDESRKSFGQAGRFNTDIVTTLRDWVAKVDGQATRAQ*