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berkeley_reactor_200306_biofilm_scaffold_31174_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 4534..5580

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase {ECO:0000256|RuleBase:RU000609, ECO:0000256|SAAS:SAAS00108511}; EC=5.3.1.5 {ECO:0000256|RuleBase:RU000609, ECO:0000256|SAAS:SAAS00108511};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 348.0
  • Bit_score: 599
  • Evalue 1.80e-168
Xylose isomerase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D947_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 348.0
  • Bit_score: 599
  • Evalue 1.30e-168
xylose isomerase similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 348.0
  • Bit_score: 599
  • Evalue 3.60e-169

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1047
ATGGGCACCGCCAAGTCCCCGACCCAGTACCGCTTCTCATTCGGCCCGTGGAACATCAGCACGGGCGCCGACCCCTTCGGCCCGCCCGTCCGCAAGGAAGTCGAATACGGCAAGAAGCTCAAGGCGTACAAGGAACTCGGTTTCGACGCCGTCCAGTTCCACGACGACGACATCGTACCCGCCGACCTCGACTGGGAGGCCACCCGCAAGGGGATCGCCGCGGTCAAGAACATCCTCGACGGCGAAGGGCTCTTCGTCGAGATCGTCGCCCCCCGCCTTTGGGAAGACCCCCGCACGGTCGACGGCGCGTTCACTTCGAACAGCCCCTCCGACCGCCGCTACGCGCTCGACCGCGCCCGCCGTTGCGCCGACATCGCCCGCGAGGTCGGCTGCAAAAACTACGTGCTCTGGCTGGCGCGCGAAGGGACCTACATCCGCGAGGCCAAGGACGCCAAGACCGCCGTCGCCCGCCTCGTGGACGCCTGGAATGCGATCCTTGAACACGACAAGGAGATCCGCATCCTCGGCGAGGCGAAGCCGAACGAGCCGATGGACTCGGCCTACCTGCCGACGGTCGGCCACATGATCGGCCTCGGCTACAAGACGATCGACCCCGCCCGGTCGGGCGTCTTGATCGAGAGCGCCCACTCCATCCTCGCCGGCCTCGACCCCGCCGACGACATGGCGTACGCCCTCTACCACGACAAGCTCTGGAGCGTCCACCTCAACGACCAGAACGGCCTCAAGTACGACCAGGACAAGACGTTCGGCTCCGTCGACCTGCGCCGCGCGTTCGACCAGGTCTGGACCCTGGAGAAGAACGGCTACGGCCAGAACGGCGAGTGCATCGGCCTCGACATCAAGGCGATGCGGACCACGGTCGTCGAAGACTCGACGCTCCACCTCGCCAACTCGAAGACGATGTTCCTCCGGCTGGTCGACATCGTCCGCGGGATCGACGAGGCCAAGGTCGAGGAACTCCGCCAGAACCGGCAGTACGAGCAGCTCGAACTGCTGATCCTCAACGCCCTCACCGGGCGTTCCTGA
PROTEIN sequence
Length: 349
MGTAKSPTQYRFSFGPWNISTGADPFGPPVRKEVEYGKKLKAYKELGFDAVQFHDDDIVPADLDWEATRKGIAAVKNILDGEGLFVEIVAPRLWEDPRTVDGAFTSNSPSDRRYALDRARRCADIAREVGCKNYVLWLAREGTYIREAKDAKTAVARLVDAWNAILEHDKEIRILGEAKPNEPMDSAYLPTVGHMIGLGYKTIDPARSGVLIESAHSILAGLDPADDMAYALYHDKLWSVHLNDQNGLKYDQDKTFGSVDLRRAFDQVWTLEKNGYGQNGECIGLDIKAMRTTVVEDSTLHLANSKTMFLRLVDIVRGIDEAKVEELRQNRQYEQLELLILNALTGRS*