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berkeley_reactor_200306_biofilm_scaffold_28291_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(19883..20599)

Top 3 Functional Annotations

Value Algorithm Source
tRNA nucleotidyltransferase {ECO:0000256|SAAS:SAAS00104188}; EC=2.7.7.56 {ECO:0000256|SAAS:SAAS00104188};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 236.0
  • Bit_score: 383
  • Evalue 1.80e-103
Ribonuclease PH n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDL8_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 236.0
  • Bit_score: 383
  • Evalue 1.30e-103
ribonuclease PH similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 236.0
  • Bit_score: 383
  • Evalue 3.60e-104

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 717
ATGGCCAGACACGATGGACGGGTGAATGACGAGTTGCGCCCCGTGGCGATCGAGCGGGGCTTCGTCCGCAACAGCCCGGGGAGCGTGCTTTACCGGTCGGGCGCGACGACCGTTTTGGTCACGGCCCAAATTTCCGATAAGGTCCCCCCGTTCCTCGAAGGGAAGGGGGTCGGCTGGTTGACGGCCGAATACTCTATGCTCCCCGGGAGCACGCCGACGCGGAAGTCGCGCGGGGCCGACGGGCGCTCGACCGAGATCCAGCGGCTGATCGGCCGGAGCCTCCGGGCCGTCATCGACACGAAGGCCCTCGGCCCGTGGACGGTCCACGTCGACGCCGACGTGATCGAGGCGGACGGCGGGACCCGCACGGCGGCCATCACCGCAGCGTTCGTCGCCGTCGCCGACGCGCTGAAGAACCGGTTCGGGGACGCCGCCCGGGGCGTGCTCCGGGACAGCGTGGCGGCCGTGAGCGTCGGGGTCGTTGCGGGGGAGGCCGTGCTCGACCTCGATTACGTCGAGGATTCGAAGGCCGAAGTAGACATGAACGTGGTCCGGCTCGGCCGGGGCGGGTTCGTCGAGGTCCAGGGGACCGGCGAATCCGGCGTCTTTTCCCGCGCCGAACTCGACCGCCTGATGGACCTTGCCGACGCGGGGATCGACCGACTCCGGCGCCTCCAGCGTGGCAGCCTGGGGGACGCCTGGCCGTTCGCCGATTAA
PROTEIN sequence
Length: 239
MARHDGRVNDELRPVAIERGFVRNSPGSVLYRSGATTVLVTAQISDKVPPFLEGKGVGWLTAEYSMLPGSTPTRKSRGADGRSTEIQRLIGRSLRAVIDTKALGPWTVHVDADVIEADGGTRTAAITAAFVAVADALKNRFGDAARGVLRDSVAAVSVGVVAGEAVLDLDYVEDSKAEVDMNVVRLGRGGFVEVQGTGESGVFSRAELDRLMDLADAGIDRLRRLQRGSLGDAWPFAD*