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berkeley_reactor_200306_biofilm_scaffold_34499_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(17994..19619)

Top 3 Functional Annotations

Value Algorithm Source
D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPV8_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 539.0
  • Bit_score: 719
  • Evalue 1.70e-204
D-alanyl-D-alanine carboxypeptidase similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 539.0
  • Bit_score: 719
  • Evalue 4.80e-205
D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family {ECO:0000313|EMBL:AGA30726.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 539.0
  • Bit_score: 719
  • Evalue 2.40e-204

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1626
ATGGGATTCCGTCCGGGTCGTTGGTCGCTAGTGGTCGGTTTCGTTCTAGGGGCGTTCCCCGCGGTTTCACCTGCCGCGGAGCCGCTCGCGGCTCGGGTGGACAAGGTGATTCACTCCCCCGGCTTCGAGACGGGACACTGGGGCCTCCTCATCGTCGACGGGAAGACGGGGAAGACCGTCTTCGAAAAGAACGCCGACCAGCTATTTTGCCCGGCGTCGGTCACCAAGCTGTTCAGTTCGGGGGCGGCCCTGGTCGACCTCGGGGCCGACTACCGGTTCCAGACCCCGGTCGTCCGCCGCGGCAAAGTCGATGAAAAGGGGACCCTGCACGGCGACCTCATCCTCGTCGGCCACGGCGACCTGAGCCTGGGGGGGCGGACCGGCCCCGACGGCACGCTACTGTTCGTCGACGACGACCACACGTACGCCGGGGGCAACCTCCGCAGCGGGCTCGTCTCCGCCGACCCGGTCGCGGGGCTCGACCACCTGGCGCGCGAAGTCCTGGCGGCGGGCATCAAGTCGGTCACGGGCGACGTCCTCGTCGACGACCGCTACTTTGAACCGGCCGAGAGCACCGGGAGCGGCCCCTCGCACGTCTCCTCGATCATGGTCAACGACAACCTCGTGGACGTGGTCGCGACCCCCGCGGAGAAGGCCGGGGAGCCGGCGGTCGTCAAACTCGTGCCGGCGACGGCTTACGTCACGGCCGACGTCAACGTCGAGACCACGGCGGAAGGGGTCGCGCCGACGCTCCAGGTGCGGCCGGTCGGCCCGCGGCGGTTCACGGTCCGGGGCCAGATCCCGGTCGGCCACGCGCCGGTCGTGAAGATTTACGAGGTCGACGACCCGGCGTCGTTCGCCCGGACCACGTTCATCGAAGCCCTCCGGAAGCGGGGGGTCGCGGTCAAAGCTTCGACCCTGGCCGACAACGCGACCGAGAAACTCCCCCCGCGGTCGGCGGTCGCCGACCTGCCGAAAGTGGCCGAATACGGGTCGCCGCCGTTGCGGGAATACCTGAAGGTGATCCTCAAGGTGAGCCACAACCTGCACGCCAGCACGCTCCCCTTGCTGTTGGCCGCGCACCACGAGGAGACGACCCTGTCGCAGGGCCTTGCCCGTGAAGGGGCGATCTTAAAGGGGCTCGGCGTCGACACGCACGCGGTCTCGTTCGGCGGCGGGGCGGGCGGTTCGCGGTCCGACATGGTCTCGCCCCGCGCTACGGTCACGCTGTTGCGCGCCCTGGCGGCCCGGCCCGACTTCCCCGCGTTCGAAGCGGCCCTGCCGGTCCTGGGGCGCGACGGCACGCTCGCCCGCGCGGTCCCCCACGAGAGCCCGGCCCGCGGCCACGCCCGCGCCAAGACGGGGACCTTCTGGGTGGACAACGGACTCGACGGCAAGGCCGTGCTGACGAGCAAGGCCCTCGCCGGCTACATGGAGACCGCCTCGGGGCAGCCGCTGGTGTTCGCCTTCTTCGTCAACGACGTGCCGCTCGACGCCTCCGGCGCGAAGCTCTCCGAAGCCACCGCCGCCGCCGGCCGCCTGCTCGGCAAACTGTGCGAGACGTTTTACACGCTCGAACCGCCCCCCGAATCGGACGCGAAGGCCGCAGCGGCGGGCTCGGACTGA
PROTEIN sequence
Length: 542
MGFRPGRWSLVVGFVLGAFPAVSPAAEPLAARVDKVIHSPGFETGHWGLLIVDGKTGKTVFEKNADQLFCPASVTKLFSSGAALVDLGADYRFQTPVVRRGKVDEKGTLHGDLILVGHGDLSLGGRTGPDGTLLFVDDDHTYAGGNLRSGLVSADPVAGLDHLAREVLAAGIKSVTGDVLVDDRYFEPAESTGSGPSHVSSIMVNDNLVDVVATPAEKAGEPAVVKLVPATAYVTADVNVETTAEGVAPTLQVRPVGPRRFTVRGQIPVGHAPVVKIYEVDDPASFARTTFIEALRKRGVAVKASTLADNATEKLPPRSAVADLPKVAEYGSPPLREYLKVILKVSHNLHASTLPLLLAAHHEETTLSQGLAREGAILKGLGVDTHAVSFGGGAGGSRSDMVSPRATVTLLRALAARPDFPAFEAALPVLGRDGTLARAVPHESPARGHARAKTGTFWVDNGLDGKAVLTSKALAGYMETASGQPLVFAFFVNDVPLDASGAKLSEATAAAGRLLGKLCETFYTLEPPPESDAKAAAAGSD*