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berkeley_reactor_200306_biofilm_scaffold_32590_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 2..1135

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLY9_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 372.0
  • Bit_score: 521
  • Evalue 3.60e-145
single-stranded-DNA-specific exonuclease RecJ similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 372.0
  • Bit_score: 521
  • Evalue 1.00e-145
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:AGA30272.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 372.0
  • Bit_score: 521
  • Evalue 5.10e-145

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1134
ATCTGCAAAGGGTTCGGCGACGGCAAAAAGGCGTCTCCCCACCTCCGCGATTTCCTGGTGAAATCGCTCGGCCTCGTCGCGCTGGCGACGGTCGCCGATGTGGTCCCTCTGGTCGGCGAAAACCGCCTCTTGGTGAAACACGGCCTGGCGGGGATCGAGGCGAACCCCAGCGAGGGGTTGAGGGCGTTGATGGAGGTCTCGGGGAGCCTGGGGAAGAAAAAACTGACGACGGGCACGGTCGGGTTCGGACTCGCGCCCCGGATCAATGCGGCCGGCCGCCTCGAACGGGCGAGCCGGGCGGTCGAGATGCTCACGACCGGGGACACCGTGCTCGCCCGCGAGATCGCCGGGGAACTCGACGCGCACAACGCCCAGCGCCAGCAGATCGAACAGACGATCGTGGCCGAGGCGCACGCGATGATCCGGGCGGCGGGGGACGTCGGCAACCGGGGGGCGCTGGTGGTCGGCCGCGAGGGGTGGCACTCCGGGGTGATCGGGATCGTGGCCAGCAGGCTGGTCGAATCGTACCACCGCCCCGCCGTCGTCGTCGCGCTGAACGAGTCGCAGGGGCAGGGTTCGGCGCGGTCGATCCCCGGTTTCAACCTCTACGAGGCGATCAAGGCGTGCTCCGAAGGGCTGACCGGGTTCGGCGGTCACGCGGCCGCGGCCGGTTTGAAACTGCCTGGCGACCGCTTCGCGGGGTTCGCCGAGCGGTTCGACCTGCACTGCCGCGAGTCGCTCACGCCTGAGCAAAAAGAGCGTGTACTCAACATCGACGCCGAGGTCATGCTCGGCACGCTCTCGCCCAAGCTCGTCGAAGAGATCGAATCACTCGAACCGTACGGGGTCGGCAACCCCCGGCCGGTCTTGTTCGCCAGCCGCGTGCGGGTGCTGGGAGAGCCGCGGATCGTCGGCGAGCGGAAAAACCACGCCCAGATCCGCCTGGCCCAGGGGGACGCCGTGGTCAAGGCGATCGCCTGGAACATGGCCGATAAATGTAAGGTGCTCACCCCCGGGGCGCTCGTCTCGGTCGCGTTCTGCCCTTCGATTAACGAATGGAACGGCCGGCGCGAAGTGCAACTCGAGGTCAAAGACTTCCGCGTCGAAGACTCCGCCGTTCTGGCGGCCGGGTAA
PROTEIN sequence
Length: 378
ICKGFGDGKKASPHLRDFLVKSLGLVALATVADVVPLVGENRLLVKHGLAGIEANPSEGLRALMEVSGSLGKKKLTTGTVGFGLAPRINAAGRLERASRAVEMLTTGDTVLAREIAGELDAHNAQRQQIEQTIVAEAHAMIRAAGDVGNRGALVVGREGWHSGVIGIVASRLVESYHRPAVVVALNESQGQGSARSIPGFNLYEAIKACSEGLTGFGGHAAAAGLKLPGDRFAGFAERFDLHCRESLTPEQKERVLNIDAEVMLGTLSPKLVEEIESLEPYGVGNPRPVLFASRVRVLGEPRIVGERKNHAQIRLAQGDAVVKAIAWNMADKCKVLTPGALVSVAFCPSINEWNGRREVQLEVKDFRVEDSAVLAAG*