ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_28014_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 18683..19168

Top 3 Functional Annotations

Value Algorithm Source
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DF41_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 161.0
  • Bit_score: 171
  • Evalue 5.10e-40
anti-anti-sigma regulatory factor similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 161.0
  • Bit_score: 171
  • Evalue 1.40e-40
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) {ECO:0000313|EMBL:AGA27296.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 161.0
  • Bit_score: 171
  • Evalue 7.20e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 486
ATGCTTAAGCCCTCGGTGCAGATCCATCACGAAAACGGGACCCTCTTGGCGGAATTTTGGGACTGCCTGCGGCTCGACCTTGGCGCCGTGCAAGACCTCAAGACGAAGTACGAGGACCACCTCAAGGCGGGGGGACGGCCCCACCTTGTGGTCGACCTCCTCGGCGTCGGGTTCGCCGGGTCGGCGGCTCTGGGTTATTTCGTCGGCCTTCAGCGGATCGCGAGGGCGAAGAACGGCCGCGTCGTCTTTTGCAACGTCGACCCGACGGTCTTCGAGGTTTTCCGCGTCAGCAAACTCGACTCCCTGTTCTCCTTCGTCCCCGACCGGGCGGCCGCACTCGCGCTGACGGCCGGGTCGGAAGCCAACGCCGACGCTTCGGAAGTCAAGTCGGCCGCGGGGGCCGGGGCGGGGACCGCGGTCCCGGCGGCACGGTCGTCCGGGTCCGAAGGGGCGTTGAAAGGTCGGAGGGGCAGAAAGCTATCGTGA
PROTEIN sequence
Length: 162
MLKPSVQIHHENGTLLAEFWDCLRLDLGAVQDLKTKYEDHLKAGGRPHLVVDLLGVGFAGSAALGYFVGLQRIARAKNGRVVFCNVDPTVFEVFRVSKLDSLFSFVPDRAAALALTAGSEANADASEVKSAAGAGAGTAVPAARSSGSEGALKGRRGRKLS*