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berkeley_reactor_200306_biofilm_scaffold_37362_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 719..1735

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRS8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 336.0
  • Bit_score: 285
  • Evalue 5.10e-74
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEF57439.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 336.0
  • Bit_score: 285
  • Evalue 7.20e-74
short-chain dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 314.0
  • Bit_score: 268
  • Evalue 1.80e-69

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1017
ATGCGGAAACGCGACGCGATTTTGCTCGGCGCCCTGGGCGGAGTCGGCGTGCTATGGGGGGCCAAAGCCGTCCGGCACTGGCGGCGCCGGATCGACCTTACCGACCGTGTCGTCGTCATCACCGGCGCGTCAAGCGGCCACGGCTTGATCGTGGCACGTCTCGCGGCTTCCCGGGGCGCCCACCTCGTGATCGCCGCGCGGTCGATCGACCAACTCCACGCCGCCGAGCCGGAATTGATCCGCGCCGGGGCGCGGAGCGTCCTCTCGGTCGCTACCGACGTCCGCGACGAGGCCCAGGCCCGCTCTTTAATTGACCGGACAATCGCAGAATATGGCCATATTGACATCCTGATTAACAACGCCGGCATTATCCAAGTCGGCCCGCTCAAGACCATGACTTTGGACGATTTCGAACAGGCCATGGCCACCAACTTTTGGGGGGCAGTCCATACGACCCTCGCCGCCCTGCCCCACATGCGGGCGGCCGGGGGTGGGCGGATCGGCAACGTTGTCTCGTTCGGCGGTAAGGTCGCGGCGCCGCACCTGGCCCCTTATTCCGCCAGTAAATTCGCCCTCGCCGGCTTTACCCAGGGTCTCCGCGCCGAACTCGCTAAAAATAACATTTACGTGACGGGTCTTTATCCCGGGACGATGCGTACCGGCGGGCACACCCACGCCCTGTTTAAAGGGAATCAGGAGGCGGAGTTTACTTGGTTCGCGCTCTCCGACTCGCTCCCGTTCGTCTCCAGTTCGGCGGAGACCGTTGCGAAACGTTTTCTGCGAGGCATTTGTAACGGCGATGCCGAGGTACGGGTCGGCCTGAAAACGTACATTGGGGCCGTCCTTCAGGGGATTTTGCCCAATGAAACGGCGGAAGTCATGGCCCTTGCCGACCGGCTTCTACCCGCCACCGACAGTCCCGATTCCCGCCCCATCCGCGGCCAGGACCTCGACGGCCCCGCCCCGCGGTTGCTGAACCGGACGATCCCGTCGGCCACAAGACCTGGATCGGCCTGA
PROTEIN sequence
Length: 339
MRKRDAILLGALGGVGVLWGAKAVRHWRRRIDLTDRVVVITGASSGHGLIVARLAASRGAHLVIAARSIDQLHAAEPELIRAGARSVLSVATDVRDEAQARSLIDRTIAEYGHIDILINNAGIIQVGPLKTMTLDDFEQAMATNFWGAVHTTLAALPHMRAAGGGRIGNVVSFGGKVAAPHLAPYSASKFALAGFTQGLRAELAKNNIYVTGLYPGTMRTGGHTHALFKGNQEAEFTWFALSDSLPFVSSSAETVAKRFLRGICNGDAEVRVGLKTYIGAVLQGILPNETAEVMALADRLLPATDSPDSRPIRGQDLDGPAPRLLNRTIPSATRPGSA*