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berkeley_reactor_200306_biofilm_scaffold_40137_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 10653..11471

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirD4 component n=2 Tax=Singulisphaera acidiphila RepID=L0DQH2_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 34.5
  • Coverage: 249.0
  • Bit_score: 129
  • Evalue 2.90e-27
type IV secretory pathway, VirD4 component similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 249.0
  • Bit_score: 129
  • Evalue 8.20e-28
Type IV secretory pathway, VirD4 component {ECO:0000313|EMBL:AGA31694.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 249.0
  • Bit_score: 129
  • Evalue 4.10e-27

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 819
ATGCCACGCCTGACGCGTTGCCTGCTGCTGTTCGCCCTGCTGCTGGCCATTGCCAGCGTCGGCCTGGTGGCCCTGCGGTTTCCGGGGATGGCCCTGCTCATCGTCGCCGGCCGCGTCGTCCTGGCGGCGCGTGGCTGGCGTGGCTCGGGCGGCACGGCCTTCGGCACCGCCCGCCTGTCGCATTTCGCCGATCTGCTGAGGCATGGCTGCCTGCCGGGGGACGATTCCGGCGACAGCCTGATCATGGGCGGTTCGGGCTATATCGCCGCCCCCTCCCTGCGGTTGGGCCTGCGGGCGTTGCTTTCGCCCGGCGTGCCGTCGGCCGTGGCTTGCCGGCTGATGCTCACCGCCCTGTGGAAGCGGTGCAATGCCGGCCTGATCCGCATCACCCACTGGGAGCACCTGCTATGCGTCGCCCCGGCCGGCGCCGGAAAAAGTTTATATGTGATCATGATGAACGCCTTCAATTACCGCGGCCCGACGGTGTTCAACGACCCGGCCGGCGAGATTTTCAAGGCGACCGCCTGGTTTCGGGAAAAGGTGCTGGGCCACCGCGTCATCCGCATCGACCCGTTCGGCATCGCCGGCGATGCGGCCTCGTCGGATTGCCTCAACCCGTTCGATTTCGTGGATGCGGACAGCGAAGACTTCCACGAAAAAATCAGGGACACGGTCGATCCCCTGATCCTGCGCGACAGCGAAAAGGAGCCGCATTTCAATGAACGGCGATCGACATCATTGCCGCAGAAGCCGCGTTCGTCTGCGCCCTCGAACAGCGGCCCGAGCATCGCAACCTGTGCACCGCCGCCGACATCCTGA
PROTEIN sequence
Length: 273
MPRLTRCLLLFALLLAIASVGLVALRFPGMALLIVAGRVVLAARGWRGSGGTAFGTARLSHFADLLRHGCLPGDDSGDSLIMGGSGYIAAPSLRLGLRALLSPGVPSAVACRLMLTALWKRCNAGLIRITHWEHLLCVAPAGAGKSLYVIMMNAFNYRGPTVFNDPAGEIFKATAWFREKVLGHRVIRIDPFGIAGDAASSDCLNPFDFVDADSEDFHEKIRDTVDPLILRDSEKEPHFNERRSTSLPQKPRSSAPSNSGPSIATCAPPPTS*