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berkeley_reactor_200306_biofilm_scaffold_62024_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 3..728

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 241.0
  • Bit_score: 421
  • Evalue 6.00e-115
Tryptophan synthase beta chain n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DA28_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 241.0
  • Bit_score: 421
  • Evalue 4.30e-115
tryptophan synthase subunit beta similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 241.0
  • Bit_score: 421
  • Evalue 1.20e-115

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 726
GCGACGGTCGTCCCCGTCACGACCGGCTCTCGGACCCTCCGCGACGCGACCAACGAGGCGATGCGCGACTGGATGGGGTCGTCGGAGACGACCCACTACACGATCGGGAGTGTCGTCGGGCCGCACCCGTTCCCGATGATCGTCCGCGACTTCCAGGCGGTGATCGGCCGCGAGGCGAAGGCGCAGTGCCTCGCCAAGATCGGCCGCCTGCCGGACTGCGTCGTCGCCTGCGTCGGCGGCGGGTCGAACGCGGCCGGGATGTTCTACCCGTTCATCGAGGACAAGTCGGTCGCCATCGTCGGCGCCGAGGCCGGCGGCCGGGGTCCGACGGCCGGCGAGCACGCGTCGAGCTTGACCCAAGGCAAGCCGGGCGTCCTCCACGGCAGCCTCAGCTACGTCCTCCAGGACGACGACGGCCAGACCCAGGACGTCCACTCGATCTCGGCCGGCCTCGACTACCCGGGCGTCGGCCCCGAGCACAGCTACTGGAAAGACACCGGCCGGGTCCGCTACGAGAGCATCACCGACGCCGAGGCCCTTGAGGCCTACAACACGACCGCGAAGCTCGAAGGCATTTTGCCCGCCCTGGAGTCGAGCCACGCCGTCGCCCAGGCGCTGAAGGAGGCCCCGAAGTTGGGGGCCGGCAAGGTGCTGGTCGTCTGCCTCTCCGGCCGCGGCGACAAGGACGCCTACGAGGTCGCCCGGCTCCGCGGCGAGCCGATGTGA
PROTEIN sequence
Length: 242
ATVVPVTTGSRTLRDATNEAMRDWMGSSETTHYTIGSVVGPHPFPMIVRDFQAVIGREAKAQCLAKIGRLPDCVVACVGGGSNAAGMFYPFIEDKSVAIVGAEAGGRGPTAGEHASSLTQGKPGVLHGSLSYVLQDDDGQTQDVHSISAGLDYPGVGPEHSYWKDTGRVRYESITDAEALEAYNTTAKLEGILPALESSHAVAQALKEAPKLGAGKVLVVCLSGRGDKDAYEVARLRGEPM*