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berkeley_reactor_200306_biofilm_scaffold_61408_28

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(32033..32974)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029B4A74 similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 283.0
  • Bit_score: 219
  • Evalue 3.20e-54
Family transcriptional regulator {ECO:0000313|EMBL:ESA34773.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.7
  • Coverage: 267.0
  • Bit_score: 164
  • Evalue 1.30e-37
ybfI; AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 268.0
  • Bit_score: 159
  • Evalue 1.40e-36

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Taxonomy

Leptolyngbya sp. Heron Island J → Leptolyngbya → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGGAAGCGGACGGACGGGGTCAAAATCAAGTCTGGATGTCCGGCAGGGTCGGGGTGGAGGCGTGGACCTCCGTGTGGGCCGCCCGGTTTCAGTGCCGGCACGCCCATGACAGTTACCAGGTCTGTCTCGGCCAGGCGGGCGCGGGTCGCTTCGTTAGCCGGACGGAGGACCAACTTTGCGACCCGGGGCGGTTCGTTCTGATCCGGCCGGGCGAAGTCCATGAGGTCCACCCGGTCGGGACCGGCGTCTGGCGTTTCGACACCCTCTACATCGCCCCCGACGTCGTGAAGGAATTCACCAGGTTTTCCCCCGAATACCCCTCGCGGGGGACAGACCTGAACCGGCCCGTTGGGTCCGGGGGCACCCTGGCGTCCGACTTCGCCAGTCTGCACAGGTGCGTCACGGATGGCGCCTCGGCCGTCGAGCAGGAGTCGCGGCTCGCCCGGCTCCTGGCGAGGTTGTCCGGCGAAACCGCCGCCTCAAGGGACGGCGAGCACATCCCGTCACCGGGCACCCCGGGTTTACGCCGCGTACGGGACTATCTGGAGTCCCTCCCCGAAGGGAACGTCACCCTGACCGAACTCGCCGAGCTTGCCGGCCTCAGCCCGTTCCACCTCACCCGCGCCTTCCGCCGCGAGTACGGGCTCCCCCCGCACGCCTATCTGATCCAGGTCCGGGTGAACCGGGCGCGGGCGATTTTGCGGCAAGGGGTCCCGGCCGCGCAGGTCGCGGCGCGGACGGGGTTCGCGGACCAGGCCCACCTGACCCGACAGTTCAAGCGGCTGGTGGGTGTCACCCCGGGCGACTACGTGCGGGGGGCAAGATCGTTCAAGATCGCCATGTCGGCCCCCCCGTATGCTGACCACACGGAGCGGCCGAAGCCCGGCGCACTGAGCGCCGGGCCGAAGGCCGCGCGACCTTTCCGTGGCCTTCAGTCATAA
PROTEIN sequence
Length: 314
MEADGRGQNQVWMSGRVGVEAWTSVWAARFQCRHAHDSYQVCLGQAGAGRFVSRTEDQLCDPGRFVLIRPGEVHEVHPVGTGVWRFDTLYIAPDVVKEFTRFSPEYPSRGTDLNRPVGSGGTLASDFASLHRCVTDGASAVEQESRLARLLARLSGETAASRDGEHIPSPGTPGLRRVRDYLESLPEGNVTLTELAELAGLSPFHLTRAFRREYGLPPHAYLIQVRVNRARAILRQGVPAAQVAARTGFADQAHLTRQFKRLVGVTPGDYVRGARSFKIAMSAPPYADHTERPKPGALSAGPKAARPFRGLQS*