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berkeley_reactor_200306_biofilm_scaffold_69909_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(606..2858)

Top 3 Functional Annotations

Value Algorithm Source
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=2 Tax=Singulisphaera acidiphila RepID=L0DEV8_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 49.9
  • Coverage: 762.0
  • Bit_score: 741
  • Evalue 7.50e-211
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase similarity KEGG
DB: KEGG
  • Identity: 49.9
  • Coverage: 762.0
  • Bit_score: 741
  • Evalue 2.10e-211
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:AGA27216.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.9
  • Coverage: 762.0
  • Bit_score: 741
  • Evalue 1.10e-210

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 2253
ATGGGAGTTCTTTGGACGTCGGCCCTTTGCGGGGGGCTCGGGCTCGCGGCGTATTGGGTGTCGCGGTACGGGCTCCGCCAAGGGGCGGGTCTCCCCCGAACGCTCGCCGCCGTGGTGCTCGGCTGGGCCTGGCTGACGGTCGGCTCGCAGGCCCTGGGGACGCTCGGCCTACTCCAACGGGGGCCGCTTTTCGCCTGGGTCGTTCTAGGGCTGATCGTCGGCTTGGGCTTTCGCCTGAAACGGCCCGGTACGCGGGAGCCCTTTGAGCAGATTCGAGATTGGTCGTGGGAGGAAGTGGCGACGGTCGGCCTGGTCCTGTGGGCAGCGGGGACGCGCGCGGCGATCTCACTCCTACACGGGGTGAAGGTCGTCAGCGACGGGCCGATCTACCACCTCTATTTCGCGGCGCGGTGGTGGAAGTCCGGGCGCCTGGAGCCGGTCGCCGCGCCATTCGGTGAAAGCGCGGTCTCCGGGCTCATGGTCGGTTGGGGGGGCGACCGCCTGGCGAAGGTGGGGCAACTCCCGTTTGCAGCCGTGGCCGGCCTCGCGGCGGTCGCACTCGCCCGACGGCTCGGGGCGGGGCGATCGGCCTCATTGATCGCGACCGCCTGGTTTTTGACGTCGTCCCCGTTCTTCATCTTCACGTTCGAGCCGAACGTCGACACGATCTTCGTCGCCGGCTACCTCCTGGCCGCCTATTTCTTCCTCCGGCACGCGCTGGGGGACGACGGACGACCGGCGCTCGCCCTCGGGGCGTTGGCCGCGGGGTGCGCGCTGGGGACGAAAGCCCCGGCGATTGTCTTCGTTCCTCCGCTCCTGGCGCTCGGCGCGGTCTCGGCTCTTGGGAAGGAACGGGGGTGGGGCGGGAAAGCCGTCGGTGTGCTAATCGTCGGCCTACTTCCACTCACGGTCGCCGGATATTGGTACGCGCGGAACCTGCTTTGGACGGGGAATCCGCTATACCCTCTCCATGTCGAAGCGTTCGGCCGGGTGTGGCTGGCGGGCTGGTACGGGCCGGACGTGATGCGGCTGAGCCAGTATTACCTGCCGGTCTCGGACTGGCGTTCGTTCTGCGACACGATGTTCCTTGTTCTCGACCCCCGACTGACCCCGATCTGGCTGGCGGCGGTGGCGGGGGTTTGGGCGGTGAAACGCAAGGAGGGCTCAGACCGACGGCTGGACGGGTTCGTCTGGTTAGCGTCGGCGCTCGCCGTGGCGAACGTCGCCCTGTTCTGGTTTGGCGTCCCGTACCGGACGCAGCCGCGGTTCATGGTCCAGGCGCTCGGCCTGGCGGCCATGCCGCTGGCGCGAGTCCTCGACCTGAGTCGAGCCTTACGGTTCCTCGGAATCGCCCTTCTCGCGGTCCACCTGCTAACGCCTCAAGAATGGCCGTTCCCGCCGGGAAATCCGCCCTGGGAATTTTCGGAGATCATTCCGAACGCCATCCCGGGCCTTGTCCACTTGCCATCGCGTTCGGGATTCGAAGAGGCACTTAGGGGCGGTCTGGCATCGATTTTCCAACAGGCGATCTCGGGCAACCCGACGCCGCTCCTGGTGGTGGGGTTGCCGGCCGTCGTCGGGCTGGCGTCTTTGGCGACAGTCCAGGCGTGGGCCGGGTTGACGTGTCGACTCGGCCGGCCCGGGTCGATAAGAAAATGGCGATGGGTCTGGGCGGGCGCGACGACAGGCGTCTTGCTGACGGCCACGGCCTCGCCGGTTTTTCCGTGGGGCGCCGACGCGAGCCAGCAGTTCTTCCCGCCGTTCCGTGACTTTTATCGGGGCTGGATGGCGCTCGACCGCGCCTCCGGGCCGGCGGGGACGCGGGTCGCGTACGCAGGGACCGACATCCCGTATTATCTGATGGGTGCCGGCCTGCGGAACGAGGTCCGGTACGTCAACGTGGACGGCCGCCACGGTTGGCTCATGCACGACTACCACCGCGCGGCGGTCGCCGACGGGACCGGCCCGGCGACGTGGCCCTACCCCCGGCCGGGCTGGGACCGCCTCCACCCCGATTACGACGCCTGGCTGGCCGCCCTGCGAGACGAAGGAATCCGGCTCCTCGTCGTCACGCGCGCGAACCCCGCCAACGGCCCGCACATCCCCGCGGACTCTGCGAACTTTCCCGTCGAGCGCCAGTGGGCGGACGGCCATCCTGACGATTTCGTACCGCTCTACGGCGCGGCGGACGGTGACACGCTCTTTCGCCTGTACCGGGTCCGCCCACGGCCTGCCCATGACGAGAGGTCTTAG
PROTEIN sequence
Length: 751
MGVLWTSALCGGLGLAAYWVSRYGLRQGAGLPRTLAAVVLGWAWLTVGSQALGTLGLLQRGPLFAWVVLGLIVGLGFRLKRPGTREPFEQIRDWSWEEVATVGLVLWAAGTRAAISLLHGVKVVSDGPIYHLYFAARWWKSGRLEPVAAPFGESAVSGLMVGWGGDRLAKVGQLPFAAVAGLAAVALARRLGAGRSASLIATAWFLTSSPFFIFTFEPNVDTIFVAGYLLAAYFFLRHALGDDGRPALALGALAAGCALGTKAPAIVFVPPLLALGAVSALGKERGWGGKAVGVLIVGLLPLTVAGYWYARNLLWTGNPLYPLHVEAFGRVWLAGWYGPDVMRLSQYYLPVSDWRSFCDTMFLVLDPRLTPIWLAAVAGVWAVKRKEGSDRRLDGFVWLASALAVANVALFWFGVPYRTQPRFMVQALGLAAMPLARVLDLSRALRFLGIALLAVHLLTPQEWPFPPGNPPWEFSEIIPNAIPGLVHLPSRSGFEEALRGGLASIFQQAISGNPTPLLVVGLPAVVGLASLATVQAWAGLTCRLGRPGSIRKWRWVWAGATTGVLLTATASPVFPWGADASQQFFPPFRDFYRGWMALDRASGPAGTRVAYAGTDIPYYLMGAGLRNEVRYVNVDGRHGWLMHDYHRAAVADGTGPATWPYPRPGWDRLHPDYDAWLAALRDEGIRLLVVTRANPANGPHIPADSANFPVERQWADGHPDDFVPLYGAADGDTLFRLYRVRPRPAHDERS*