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berkeley_reactor_200306_biofilm_scaffold_82582_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 488..2359

Top 3 Functional Annotations

Value Algorithm Source
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBG5_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 623.0
  • Bit_score: 931
  • Evalue 4.30e-268
thiamine pyrophosphate-dependent protein similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 623.0
  • Bit_score: 931
  • Evalue 1.20e-268
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase {ECO:0000313|EMBL:AGA26587.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 623.0
  • Bit_score: 931
  • Evalue 6.00e-268

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1872
GTGATCCCGAACCTCAACCGACGTGAAGCGCTGGGCGTACTCGGAACGATCGGCGCGGCCGCCTCGGTGGCGACGGGGCCCGAGGAGGCCCATGCGGGACGCGTCGAGGTCGGCCGCTACACCCGCCGGGTGGGCGTGCAGGGGAAGATGACCGGCGCCCAGGTCGCCGCCGCGGCCCTCTGGTGCGAGGGCGTCCCGTGCGTCTTCGGTGTCCCGGGCGCCCAGAACAATGAGTTGTGGGACGCCTTCAAGGCCCGCCAGCTTCCTTACCTCTTGGTCGCGAACGAGTCCTCGGCGAGCGTCATGGCCGACGCCGCGGCGCGGGCCACGGGGGGCGTGGGGGTCTTCGCCGTCGTCCCGGGGCCCGGCCTGACCAACGCGATGACCGGGATCGGCGAGGCGCTGCTGGATAGCGTGCCGTTCGTCGGGATCGTCACCGACGTGAACCGGGCCCCGGGCGCCCCGGTCGGGCAGGTCCACTCGCTGCCCAACGCGGCGATGCTCCGCCCGATCGTCAAGTGCGTGATCGAGGTGCGCCACCAGTCCGAGATCCCCGGCGCGATCCATCAAGCGTTTCGCGTGGCGCGGTCGGGCGAACCGGGGCCGGTGGCCGTGGTCATCCCGTTCCCGTTCTATAGCCAGGCCTGGGATTTCGACCAGGGGGTTCCCCCCCCCTACCCCGTGCCGTTCGACGAGGCCGTTTACCCGAAGGTGCTCGGCCACCTGGCCGACAAGCGCCGCCGGGTCGGGATCTACGCGGGCCTCGGCTGCGTCGACTCGGGGCCGTCGCTCGCCGCGGTGGCCGAGTTACTCCAGGCCCCGGTGGCCACGTCGGTTAGCGGCAAGGGGGCGATCCCCGACCACCACCCGCTGGCCGTCGGCTGGGGCTACGGCAAGCAAGGGACCCGCGCCGCCGAGCGGGCGTTCCGCGAGGTCGACCTGGTCCTCGCCGTCGGCGTGAAGTTCAGCGAGGTCTCGACCGCGAATTTCGCCGTCCCCCGCCACGACACGCTGATCCACGTCGACGCCAACCCCCACAACCTCGGCCGCAACGTCCCCGCGCACGTCACCATGTGTTCCGACGCGCGGGTCTTCCTCGACCGCCTGATCGCCGACGGCAACGCGATCCGGCGCTGCCCCGACCCCGCCCTTCTGGCGCGGATCAAGAAAGACCGCGAGGTCGACCGCGTCGAGAACACCCGCGTTCAAATCCCCTGCGCGGTCGACCCGATGGTCTTCCTCTCCCATTTGCGCGGTGCGCTCGGGCCGGACGAGTTGATCTTCGTGGACGTGACGGCGTCGACCCACTGGGCGTCGGAAACGATCACGGTCCCGGGCCCGCGGCGGTACTTCACGCCGGCGAACAACCAGAGCATGGGCTGGGCCATCCCCGCGGCGATCGGCGCGCAGCGCGTCCGGCCGGACCGGATGGTCGTTTCGGTCACGGGGGACGGCTGCTTCCTGATGTCGGCCATCGAGATGTCGACGGCCGCGCGGGCGGGGCTGCCGGTCAAGTTCTTCGTGTTCGACGACGGCGCGTACCACTACATGCAGATGCTCCAGGAGCCGGTTTATCGCCGCACGACCGCGACCGAGATCGCGCGGATCGACTTCGCGGCGTTCGCCGCGGGCGTGGGCCTGGCGTTCAACCAGATCGGCTCGAACGGCGAGATCGGTCCGGGGCTGGCCCGGGCGCTGGGCACGCCGGGCCCCGTGCTGACCCGCGTGGTGGTCAGCTACGAGGGGCGGGAGATCCGCTGGCTCAGCGCCTTGCGCTCGACCTACCTCAAACACCTCCCCAACGACCAAAAAGTCCGCATGGCCTCCCGGGTCGGGGTCCGGACGCTGCAACGGAAAGAGGACAGCGACTGA
PROTEIN sequence
Length: 624
VIPNLNRREALGVLGTIGAAASVATGPEEAHAGRVEVGRYTRRVGVQGKMTGAQVAAAALWCEGVPCVFGVPGAQNNELWDAFKARQLPYLLVANESSASVMADAAARATGGVGVFAVVPGPGLTNAMTGIGEALLDSVPFVGIVTDVNRAPGAPVGQVHSLPNAAMLRPIVKCVIEVRHQSEIPGAIHQAFRVARSGEPGPVAVVIPFPFYSQAWDFDQGVPPPYPVPFDEAVYPKVLGHLADKRRRVGIYAGLGCVDSGPSLAAVAELLQAPVATSVSGKGAIPDHHPLAVGWGYGKQGTRAAERAFREVDLVLAVGVKFSEVSTANFAVPRHDTLIHVDANPHNLGRNVPAHVTMCSDARVFLDRLIADGNAIRRCPDPALLARIKKDREVDRVENTRVQIPCAVDPMVFLSHLRGALGPDELIFVDVTASTHWASETITVPGPRRYFTPANNQSMGWAIPAAIGAQRVRPDRMVVSVTGDGCFLMSAIEMSTAARAGLPVKFFVFDDGAYHYMQMLQEPVYRRTTATEIARIDFAAFAAGVGLAFNQIGSNGEIGPGLARALGTPGPVLTRVVVSYEGREIRWLSALRSTYLKHLPNDQKVRMASRVGVRTLQRKEDSD*