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berkeley_reactor_200306_biofilm_scaffold_85493_7

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(5822..6550)

Top 3 Functional Annotations

Value Algorithm Source
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 224.0
  • Bit_score: 352
  • Evalue 3.40e-94
Deoxyribose-phosphate aldolase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9M4_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 224.0
  • Bit_score: 352
  • Evalue 2.40e-94
deoxyribose-phosphate aldolase similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 224.0
  • Bit_score: 352
  • Evalue 6.90e-95

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 729
ATGGAACTGACGTACGAAGCGATCGCCAAACGGATTGATCATTCGCTGCTCCCGCCGGCGTTGACCGAGGCGCAACTCGTCGACGGCTGTCGGCTCGCCGCGCAATACCAAGTGGCGAGCGTCTGCATCAAGCCTTACGCCGTGCCCCTCGCGGCCAAGATTCTGGCGGGGACGGGGGTACTCGTCGGCACGACGATCGGGTTCCCGCACGGGGGACACCACACGGCCGTCAAGGTGTTTGAGGCCGAGCGTGCGATGGACGAGGGGGCGACCGAACTGGACATGGTCGTGAACATCGGCCAGGCGGTCGGCGATCAGTGGGCTGAGGTTAAAGCCGACATAGACGCCGTGACGAAGGCGGCCCACGCGCGCGGGGCGGTCGTGAAGGTCATCTTCGAGAATTGCTATTTGACCGACGCTCAGAAGGTCAAGCTTTGCGAGATCTGCGGCGAGGTCGGCGCGGACTACGTGAAGACGTCGACCGGGTTCGGGACCGGCGGCGCGACCCCGGCCGACCTGATCCTCATGCGGAAGGCTACGCCGCCACACGTGAAGCTCAAAGCCGCCGGCGGTATCCGGGATCTGGACCAGGCGATCGCGGTCGCCGAGTTAGGCTGTGACCGCATCGGCGCGAGTCAGACGGCCACGATCCTCGACGAGCTGCGGTTGCGGCTCGGCCTCGCCCCGCTCGCGGTTTCACGTGGAACCGCCGCGCCCGACGGCTACTGA
PROTEIN sequence
Length: 243
MELTYEAIAKRIDHSLLPPALTEAQLVDGCRLAAQYQVASVCIKPYAVPLAAKILAGTGVLVGTTIGFPHGGHHTAVKVFEAERAMDEGATELDMVVNIGQAVGDQWAEVKADIDAVTKAAHARGAVVKVIFENCYLTDAQKVKLCEICGEVGADYVKTSTGFGTGGATPADLILMRKATPPHVKLKAAGGIRDLDQAIAVAELGCDRIGASQTATILDELRLRLGLAPLAVSRGTAAPDGY*