ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_88987_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 4964..6766

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c peroxidase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEH8_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 587.0
  • Bit_score: 628
  • Evalue 5.70e-177
cytochrome c peroxidase similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 587.0
  • Bit_score: 628
  • Evalue 1.60e-177
Cytochrome c peroxidase {ECO:0000313|EMBL:AGA27260.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 587.0
  • Bit_score: 628
  • Evalue 8.00e-177

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1803
ATGACGACCCGAACGGCAGTGGGGTGGTGGAGCGCCCTTTTCCCGCTCGTTTTGCTGTTCCCCGTCGGGTCTACCGCGGTCAGAGCGGCCGACGTGAAGGCGTCTCAACCCGCCGCGCCGGAGGGCCCACAGGTCCCCGTGGCCCTGGCCTGGGGACCGGGGGGGACGCTTCGGGTCGCCCTCCGGGACGCCCGGCACCTCGTGACGGTCGACCCCGAATCTGGCCGCATTCTCGACCGCCTGGCGTTACCGGTCCGCCCCTCATCGCTCGCCACTCTTGGCGACGGAACGACCCTACTCGTAGGCGGGATGGACGGCGATTTGATCACCGTCAAGTCGGGCGTTCCGACCCCCCTGCTCCGCGCCAACGGCCGCGGGCCGGTCCAGGTCGTTGCGCTCGATGGGGGCCGTGCGGCGGTCGCCTCGACCTGGGATTCGACGGTCCGGGTGGTCGACGTAACGAACGGACGGATCGAACGGACCATTGAACTCCCGTTTTCGGCCGGGGCGCTACTCGCACGACCGGGGCGTGGCTTGATCGCCGCCGCCGCGTTCGGCGGCAAATTGGCCGACATTCATCTTGAATCCGGGCGCGTGCGGACCCGCACCTTGGAGGGCGTCAACCTCAGCGCACTGGCGTTTTCGGGCGACGGCAAGGAACTCCTCGTCGGCCACATGGCGCAGTACGGGCAAGTGCCTGTCACTTCAACGAACATTGATTGGGGACTGGTCCTGTCGAGCCGGCTCAGCGCCGTCCGGCTTTCGGAGTTCGACAAGGGCAGCCCGGGGGACGACGGCGGTGCCGTCGCGGGACGGCAACTAACGTTGGACGGCTCCGTGCACGGCGCGGCCGACCCCTCCGCCCTGGCCGTGAGCCCGGACGGCGCTCTCGTCATGATCGCGCTTTCGGGCGCCCATCAAGTCCTTAAGAACGACCGCCGGCTCGGCTCGTCGGGGCCCGAATTCTCGGACCTCCTCCCGCTCGGGCACAACCAAGGCTTAGAGACCGTTGAAGTCGGTCGGAGCCCCGTCGACGTCGTGTTCGACCCGTCGGGCAAAACGGTCGTGACGGCCGATTCCATGTCGGACACGTTAACCGTCGTCCGGGTCACCGATCTGTCCGTCGTGCGGACGATCCGCCTGGGGCCCGACGTCGTGAAGCGTACGGCCGCGCAGCGCGGGGAAGTCGCCTTCCGAGACGGCCGCCTGGCGCTCGACCGCTGGATGAGTTGCGCGAGCTGTCACCCGTCCGGCCACACCAACGGTCTGAATTTCGACACGCTCGGTGACGGCGGCTACGGGGCCGCGAAGAACACTCCGACCCTCCTGGGCGTCGGCCCGACAGAACCGTTTGCCTGGACCGGACGGTTTCCTTCACTGGCCGCCCAGGTCCACCAATCGCTTCAGACGAGCCTCCGCGGCTCTTCGCCCGACGAGCAGAGCGTGGCCGACCTATCGGCCTATCTCGCGACACTGGCCCCCCCGCCGGCCCGTCGGCCCGCCGACGACCCGTCCGTCCGCCGAGGCGCCCTCGTCTTCGAAGCCCGAGGTTGCCAGGGGTGCCATCGCCCCCCACTTTACACGTCAGGCGGGCTGAAGGACGTCGGACTCGACGACGGACCCGGCGGCCATCGGGCGTTTAACCCGCCCTCTTTGCGTGGCGTCGGTTGGACGGCCCCGTATTTCCATGACGGTCGCGCCTCATCCCTCGACGAGGTCCTGAAGACCCATACTCCTGCGGCTCGCGCTCCCCTTTCACCAGCCGATCGTGCCGATTTGAACGCGTTCCTCGAATCGCTCTAA
PROTEIN sequence
Length: 601
MTTRTAVGWWSALFPLVLLFPVGSTAVRAADVKASQPAAPEGPQVPVALAWGPGGTLRVALRDARHLVTVDPESGRILDRLALPVRPSSLATLGDGTTLLVGGMDGDLITVKSGVPTPLLRANGRGPVQVVALDGGRAAVASTWDSTVRVVDVTNGRIERTIELPFSAGALLARPGRGLIAAAAFGGKLADIHLESGRVRTRTLEGVNLSALAFSGDGKELLVGHMAQYGQVPVTSTNIDWGLVLSSRLSAVRLSEFDKGSPGDDGGAVAGRQLTLDGSVHGAADPSALAVSPDGALVMIALSGAHQVLKNDRRLGSSGPEFSDLLPLGHNQGLETVEVGRSPVDVVFDPSGKTVVTADSMSDTLTVVRVTDLSVVRTIRLGPDVVKRTAAQRGEVAFRDGRLALDRWMSCASCHPSGHTNGLNFDTLGDGGYGAAKNTPTLLGVGPTEPFAWTGRFPSLAAQVHQSLQTSLRGSSPDEQSVADLSAYLATLAPPPARRPADDPSVRRGALVFEARGCQGCHRPPLYTSGGLKDVGLDDGPGGHRAFNPPSLRGVGWTAPYFHDGRASSLDEVLKTHTPAARAPLSPADRADLNAFLESL*