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berkeley_reactor_200306_biofilm_scaffold_89105_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(4650..5417)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8Y7_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 233.0
  • Bit_score: 395
  • Evalue 2.60e-107
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 233.0
  • Bit_score: 395
  • Evalue 7.50e-108
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGA25293.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 233.0
  • Bit_score: 395
  • Evalue 3.70e-107

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 768
GTGAGGGGCTTCGTCTACAATGATAATGGGAAAGACGGCGCGCCCGGGTTCGCGGAGGGGTTGGTCGTGGGAATCCGCATTTTGGTCGTCGAGGACGACGAACTGATCTCCGCCTCGGTGGTGCGCGGGCTGCGCGAGGAGGGGTACGTCGTCGAGCACGCCGCCGACGGCGAGGACGCCTGGGCGGCCCTGCAAGCCGGCGGCTGGGACCTCGTCATCCTCGACTGGTGGCTCCCCGCGCAGGACGGCCTGACGGTCCTCCGCCGGTTCCGCCAGCGCGACCGGGATACCCCCGTGCTGTTCCTGACCGCCCGCGACGCCGTCTCCGACCGGGTCCGCGGGCTCGACGGAGGGGCGGACGATTACTTGTGCAAGCCGTTTGCTTTCGACGAACTGCTCGCGCGCGTCCGCGCCCTGCTCCGCCGCGGCGAGGGGCGCGCCGGGACGGTCCTGTCGTCGTGCGGCGTGACGATCGACCTGGCGACCCAGCGCGTCGAGCGGGACGGACACCCGATCGACCTGACCGCGAAGGAGTACACCCTCCTCGTTTTCTTCCTGCGCCACCCCGGGGAAGTGCTGTCGCGGACGCGGATTTATGACCACGTCTGGGACGAGCGCTACGACGGGCTCTCCAACACGATCGAGGTCCACGTCTTCGAGCTGCGCCGGAAACTCGAAGCCCACGGCGGTCGGCTGATCCACACCCTGCGCGGCCGGGGTTACGTCTTCGGCGCGCCGCCGGGCTCGGCCGGCGGGGAGACGGCATGA
PROTEIN sequence
Length: 256
VRGFVYNDNGKDGAPGFAEGLVVGIRILVVEDDELISASVVRGLREEGYVVEHAADGEDAWAALQAGGWDLVILDWWLPAQDGLTVLRRFRQRDRDTPVLFLTARDAVSDRVRGLDGGADDYLCKPFAFDELLARVRALLRRGEGRAGTVLSSCGVTIDLATQRVERDGHPIDLTAKEYTLLVFFLRHPGEVLSRTRIYDHVWDERYDGLSNTIEVHVFELRRKLEAHGGRLIHTLRGRGYVFGAPPGSAGGETA*