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berkeley_reactor_200306_biofilm_scaffold_121646_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 4326..5225

Top 3 Functional Annotations

Value Algorithm Source
xylose isomerase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A8F similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 298.0
  • Bit_score: 497
  • Evalue 7.60e-138
sugar phosphate isomerase/epimerase similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 298.0
  • Bit_score: 495
  • Evalue 6.20e-138
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:AGA30737.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 298.0
  • Bit_score: 495
  • Evalue 3.10e-137

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 900
GTGCCTTTGAAGATATCCGCCTTCCCCAAGTGTTACCTCGACGCGATCGCGGGCGATCGGACGATGTCGGTCTTCGACTGGATCGAGATGGCCCGGACGCTCGACGCCGACGGCCTCGAAATGTACGACGGCTTCTTCACGTCGCTCGACGACGGGTATATCGACTCCGTCGGCGCAGCGATCCGCTCCGCCGGCTTCGAAATGCCGATGCTCTGCTGCTCCCCCGACTTCACCAACCCGGACCCCGACGCGCGCAAGCGGGCCGTCGACCGCGAGGTCGCGATGGTCCGCGTGGCCCGTCGGCTCGGCGGACCTGGGACCGTCTGCCGCGTCCTCTCGGGCCAGCGCTACCCGGACGTCGAGCGGACGCAGGGTCTAGAATGGGTGGTCTCCTGCATCGAACAGGTCTTGCCGGTAGCCCGTGCGGAGGGGATCGTCCTGGGGTTGGAGAACCATTACAAGGACGGCTTCTGGAAGTACCCCGAGTTCGCCCAGAAGATGGACGTCTTCCTCGAACTCGTCGCCGCGATCGACGACCGAGAGCACTTCGGCGTCCAGTACGACCCGTCGAACGCGATCGTCGCGGGCGACGACCCGCTCGCGCTGCTCGACGCCGTGGCCGACCGGGTCGTGAGCATGCACGCCAGCGACCGCTACCTCGCCAACGGGGCGACGCTCGACGACCTTCGTCAGTCAGACGGGACGCTCGGCTACTCGCCCGATCTGCGGCACGGCGTGACCGGCAAGGGTTTAAACGACTACGACGCCATCTTCCGCACGCTGGCCGCACACAACTACCGCGGTTGGGTCAGCATCGAAGACGGCATGAACGGCATGGGCGAGATGGCCGAATCCCTGGCCTTCCTCCGGCGCATGAGTGACCAGTATTTCCCGGGGTAA
PROTEIN sequence
Length: 300
VPLKISAFPKCYLDAIAGDRTMSVFDWIEMARTLDADGLEMYDGFFTSLDDGYIDSVGAAIRSAGFEMPMLCCSPDFTNPDPDARKRAVDREVAMVRVARRLGGPGTVCRVLSGQRYPDVERTQGLEWVVSCIEQVLPVARAEGIVLGLENHYKDGFWKYPEFAQKMDVFLELVAAIDDREHFGVQYDPSNAIVAGDDPLALLDAVADRVVSMHASDRYLANGATLDDLRQSDGTLGYSPDLRHGVTGKGLNDYDAIFRTLAAHNYRGWVSIEDGMNGMGEMAESLAFLRRMSDQYFPG*